RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PRR5-ARHGAP8B1AHC4 643 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 LIN7AO14910 233 aaPredicted RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 ATP9BO43861 1147 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 LYPLA1O75608 230 aaPredicted RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 ANXA9O76027 345 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 PSMG1O95456 288 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 SKIP12755 728 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 HOXC13P31276 330 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 ARHGAP8P85298 464 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 TUSC3Q13454 348 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 RCN2Q14257 317 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 TSNAXIP1Q2TAA8 658 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 CMC1Q7Z7K0 106 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 TRPV1Q8NER1 839 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 KCNV2Q8TDN2 545 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 AGAP2Q99490 1192 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 CATSPERBQ9H7T0 1116 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 AGO3Q9H9G7 860 aaKnown RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 STX18Q9P2W9 335 aaKnown RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 PADI3Q9ULW8 664 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 ANKRD6Q9Y2G4 727 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 FNDC1Q4ZHG4 1894 aaPredicted RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 TDRD15B5MCY1 1934 aaKnown RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 IRAK2O43187 625 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 CYBAP13498 195 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 VHLP40337 213 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 TSPY1Q01534 308 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 KDSRQ06136 332 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 CCDC6Q16204 474 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 TRMT5Q32P41 509 aaKnown RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 CTU1Q7Z7A3 348 aaKnown RBP17.54■□□□□ 0.4
BRCA2-204ENST00000530893 SCUBE1Q8IWY4 988 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 RDH11Q8TC12 318 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 RHOBTB2Q9BYZ6 727 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 ZFYVE28Q9HCC9 887 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 CHRAC1Q9NRG0 131 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 NEU3Q9UQ49 428 aa17.54■□□□□ 0.4
BRCA2-204ENST00000530893 NUP205Q92621 2012 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 PTPRDP23468 1912 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 CIB2O75838 187 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 CPA2P48052 419 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 POLD2P49005 469 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 CSRP3P50461 194 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 PRKAA2P54646 552 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 SLC34A1Q06495 639 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 ITGA9Q13797 1035 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 RCN1Q15293 331 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 UGP2Q16851 508 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 ANO4Q32M45 955 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 ARMC3Q5W041 872 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 IFNL1Q8IU54 200 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 ATPAF2Q8N5M1 289 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 PTCD2Q8WV60 388 aaKnown RBP17.53■□□□□ 0.4
BRCA2-204ENST00000530893 RSPH1Q8WYR4 309 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 VPS39Q96JC1 886 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 FCRL5Q96RD9 977 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 GPR22Q99680 433 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 SMOC2Q9H3U7 446 aa17.53■□□□□ 0.4
BRCA2-204ENST00000530893 C2P06681 752 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 ACADSP16219 412 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 TYMPP19971 482 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 ATP6V1C1P21283 382 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 CCR1P32246 355 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 IDH3AP50213 366 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 HK2P52789 917 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 DSC3Q14574 896 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 PCID2Q5JVF3 399 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 MFSD14CQ5VZR4 134 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 OVOS1Q6IE37 1185 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 RWDD4Q6NW29 188 aaKnown RBP17.52■□□□□ 0.4
BRCA2-204ENST00000530893 LRRC49Q8IUZ0 686 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 CNTD1Q8N815 330 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 GPATCH11Q8N954 259 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 WDR60Q8WVS4 1066 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 FAM161BQ96MY7 647 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 IL12RB2Q99665 862 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 RHOJQ9H4E5 214 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 NMRAL1Q9HBL8 299 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 ZNF212Q9UDV6 495 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 SNX10Q9Y5X0 201 aa17.52■□□□□ 0.4
BRCA2-204ENST00000530893 G3V2L1 256 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 ZNF195O14628 629 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 TRIM13O60858 407 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 SIN3BO75182 1162 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 POMCP01189 267 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 UBAP2LQ14157 1087 aaKnown RBP17.52■□□□□ 0.39
BRCA2-204ENST00000530893 PPP2R5DQ14738 602 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 ZRSR2Q15696 482 aaKnown RBP17.52■□□□□ 0.39
BRCA2-204ENST00000530893 MANEALQ5VSG8 457 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 TIGD7Q6NT04 549 aaPredicted RBP17.52■□□□□ 0.39
BRCA2-204ENST00000530893 CD300LGQ6UXG3 332 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 ULK2Q8IYT8 1036 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 PLD6Q8N2A8 252 aaKnown RBP17.52■□□□□ 0.39
BRCA2-204ENST00000530893 CELF6Q96J87 481 aaKnown RBP17.52■□□□□ 0.39
BRCA2-204ENST00000530893 SUSD3Q96L08 255 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 IARS2Q9NSE4 1012 aaKnown RBP17.52■□□□□ 0.39
BRCA2-204ENST00000530893 TMLHEQ9NVH6 421 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 FNIP2Q9P278 1114 aa17.52■□□□□ 0.39
BRCA2-204ENST00000530893 NLRC5Q86WI3 1866 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms