RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 NXPH1P58417 271 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 CAMK2BQ13554 666 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 DRAP1Q14919 205 aaPredicted RBP15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 MAN2A1Q16706 1144 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 C5orf22Q49AR2 442 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 TAF3Q5VWG9 929 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 ZNF397Q8NF99 534 aaPredicted RBP15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 PIP4K2CQ8TBX8 421 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 HNRNPLLQ8WVV9 542 aaKnown RBP15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 FAM131CQ96AQ9 280 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 SKA1Q96BD8 255 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 NDST4Q9H3R1 872 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 WDCPQ9H6R7 721 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 CAAP1Q9H8G2 361 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 SLC25A13Q9UJS0 675 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 TBC1D30Q9Y2I9 924 aa15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 NYNRINQ9P2P1 1898 aaKnown RBP15.95■□□□□ 0.14
CLNS1A-210ENST00000528364 MCF2LO15068 1137 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 SMAD6O43541 496 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 PLRG1O43660 514 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 CLDN11O75508 207 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 LDOC1O95751 146 aaPredicted RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 CTSLP07711 333 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 SRCP12931 536 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 ZNF18P17022 549 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 SULT1E1P49888 294 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 VASPP50552 380 aaPredicted RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 CDH4P55283 916 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 TAS2R38P59533 333 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 RAPGEF1Q13905 1077 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 SMAD1Q15797 465 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 DPCR1Q3MIW9 517 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 VWA3BQ502W6 1294 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 ARTNQ5T4W7 220 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 AGBL4Q5VU57 503 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 PRPF39Q86UA1 669 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 ZNF683Q8IZ20 524 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 SH2D3CQ8N5H7 860 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 KLK6Q92876 244 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 CNDP2Q96KP4 475 aaKnown RBP15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 TBCBQ99426 244 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 TUBGCP2Q9BSJ2 902 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 MUC3BQ9H195 1237 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 PDCL3Q9H2J4 239 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 GDF3Q9NR23 364 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 ARHGEF38Q9NXL2 777 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 MPP6Q9NZW5 540 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 FHOD1Q9Y613 1164 aa15.94■□□□□ 0.14
CLNS1A-210ENST00000528364 A0A0D9SEW6 157 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 ENC1O14682 589 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 CYP11B1P15538 503 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 GLDCP23378 1020 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 RRM1P23921 792 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 SNX16P57768 344 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 COL28A1Q2UY09 1125 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 KLHDC7AQ5VTJ3 777 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 FAM46CQ5VWP2 391 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 NAPEPLDQ6IQ20 393 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 TRNP1Q6NT89 227 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 LINGO4Q6UY18 593 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 GALNT15Q8N3T1 639 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 MFSD2AQ8NA29 543 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 CHST14Q8NCH0 376 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 NT5C3BQ969T7 300 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 ARRDC3Q96B67 414 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 C18orf8Q96DM3 657 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 PPP1R9BQ96SB3 815 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 CLSTN2Q9H4D0 955 aa15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 SAMSN1Q9NSI8 373 aaKnown RBP15.93■□□□□ 0.14
CLNS1A-210ENST00000528364 TDRD6O60522 2096 aaKnown RBP15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 DRGXA6NNA5 263 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 GOLGA8SH3BPF8 625 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 SLC31A1O15431 190 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 ENDOD1O94919 500 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 RHOCP08134 193 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 EPHA8P29322 1005 aaPredicted RBP15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 CDH5P33151 784 aaPredicted RBP15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 FLT3P36888 993 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 GABRB2P47870 512 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 BPIFB4P59827 614 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 DEUP1Q05D60 604 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 COL9A2Q14055 689 aaPredicted RBP15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 RAB6CQ53S08 254 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 SLC45A4Q5BKX6 768 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 TFAP2DQ7Z6R9 452 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 DSG4Q86SJ6 1040 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 ERICH1Q86X53 443 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 XYLT1Q86Y38 959 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 ATP11CQ8NB49 1132 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 TMEM35BQ8NCS4 154 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 OR7D4Q8NG98 312 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 OR2A12Q8NGT7 310 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 MYOCQ99972 504 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 RAB6CQ9H0N0 254 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 VPS51Q9UID3 782 aa15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 FASNP49327 2511 aaKnown RBP15.92■□□□□ 0.14
CLNS1A-210ENST00000528364 WDFY3Q8IZQ1 3526 aa15.91■□□□□ 0.14
CLNS1A-210ENST00000528364 C1QTNF3-AMACRE9PGA6 284 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms