RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PCDHB8Q9UN66 801 aa15.65■□□□□ 0.1
USH1C-207ENST00000527720 DNAJC16Q9Y2G8 782 aa15.65■□□□□ 0.1
USH1C-207ENST00000527720 DOCK4Q8N1I0 1966 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 MIA3Q5JRA6 1907 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 TNFRSF10BO14763 440 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 CA12O43570 354 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 MAGEC1O60732 1142 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 DIAPH2O60879 1101 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 RALBP11234 206 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 CPA3P15088 417 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 ALOX15P16050 662 aaPredicted RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 HARS2P49590 506 aaKnown RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 SLC5A3P53794 718 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 NRG1Q02297 640 aaPredicted RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 KCNA10Q16322 511 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 HSP90AA5PQ58FG0 334 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 PPM1JQ5JR12 505 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 ZNF598Q86UK7 904 aaKnown RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 LCA5Q86VQ0 697 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 LRRC49Q8IUZ0 686 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 CNTD1Q8N815 330 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 SCAMP5Q8TAC9 235 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 SREK1Q8WXA9 508 aaKnown RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 CELF6Q96J87 481 aaKnown RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 TMEM209Q96SK2 561 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 C1orf21Q9H246 121 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 C20orf96Q9NUD7 363 aaPredicted RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 DNAJC28Q9NX36 388 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 FNIP2Q9P278 1114 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 MID2Q9UJV3 735 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 ITM2AO43736 263 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 H2AFYO75367 372 aaKnown RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 ABCE1P61221 599 aaKnown RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 CCSAPQ6IQ19 270 aaPredicted RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 TIGD7Q6NT04 549 aaPredicted RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 TREML1Q86YW5 311 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 ARHGAP12Q8IWW6 846 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 URGCPQ8TCY9 931 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 ZNF778Q96MU6 729 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 AGAP2Q99490 1192 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 CHRAC1Q9NRG0 131 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 NKX1-2Q9UD57 310 aaPredicted RBP15.64■□□□□ 0.09
USH1C-207ENST00000527720 ANKRD6Q9Y2G4 727 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 INPP5FQ9Y2H2 1132 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 MYLKQ15746 1914 aa15.64■□□□□ 0.09
USH1C-207ENST00000527720 MATN3O15232 486 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 PAGE1O75459 146 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 KLHL2O95198 593 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 APOA4P06727 396 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 AOC1P19801 751 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 DNAJB1P25685 340 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 RAP1GDS1P52306 607 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 YWHAHQ04917 246 aaPredicted RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 DNAL1Q4LDG9 190 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 PCID2Q5JVF3 399 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 ARMC3Q5W041 872 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 CMC1Q7Z7K0 106 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 PCSK9Q8NBP7 692 aaKnown RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 HASPINQ8TF76 798 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 PTCD2Q8WV60 388 aaKnown RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 SORT1Q99523 831 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 SIK2Q9H0K1 926 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 GABRQQ9UN88 632 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 APOBEC2Q9Y235 224 aaKnown RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 A0A096LPK6 155 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 B2RBV5 119 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 SPECC1L-ADORA2AF8WAN1 911 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 DFFAO00273 331 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 LYPLA1O75608 230 aaPredicted RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 ENO1P06733 434 aaKnown RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 GRIK1P39086 918 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 TM4SF4P48230 202 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 POLD2P49005 469 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 FLT3LGP49771 235 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 CSRP3P50461 194 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 GEMP55040 296 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 CACNB2Q08289 660 aaPredicted RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 TUBB3Q13509 450 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 TRIM71Q2Q1W2 868 aaKnown RBP15.63■□□□□ 0.09
USH1C-207ENST00000527720 VPS39Q96JC1 886 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 GPR22Q99680 433 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 TBL1YQ9BQ87 522 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 GLOD4Q9HC38 313 aa15.63■□□□□ 0.09
USH1C-207ENST00000527720 FAM155AB1AL88 458 aaPredicted RBP15.62■□□□□ 0.09
USH1C-207ENST00000527720 TMEM114B3SHH9 223 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 MAFKO60675 156 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 ENTPD5O75356 428 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 ELF1P32519 619 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 UGP2Q16851 508 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 ANO4Q32M45 955 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 RFWD3Q6PCD5 774 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 OTOP3Q7RTS5 596 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 RDH11Q8TC12 318 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 SERPINB11Q96P15 392 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 APOL2Q9BQE5 337 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 EBF4Q9BQW3 602 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 MRM3Q9HC36 420 aaKnown RBP15.62■□□□□ 0.09
USH1C-207ENST00000527720 IARS2Q9NSE4 1012 aaKnown RBP15.62■□□□□ 0.09
USH1C-207ENST00000527720 PCDHB12Q9Y5F1 795 aa15.62■□□□□ 0.09
USH1C-207ENST00000527720 TTC3P53804 2025 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms