RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 ZNF669Q96BR6 464 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 CERS2Q96G23 380 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 LPIN3Q9BQK8 851 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 ILKAPQ9H0C8 392 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-208ENST00000527323 STK39Q9UEW8 545 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 AP4B1Q9Y6B7 739 aa12.76□□□□□ -0.37
CAPN1-208ENST00000527323 A0A096LPK6 155 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 TRIM13O60858 407 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 USP12O75317 370 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 CRTAMO95727 393 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ASLP04424 464 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 MMP3P08254 477 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ALOX15P16050 662 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 TCN1P20061 433 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PRDX6P30041 224 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ART3Q13508 389 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 OLIG2Q13516 323 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 DLG2Q15700 870 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 HSP90AA5PQ58FG0 334 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 MORN1Q5T089 497 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 NCBP2-AS2Q69YL0 99 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 BNC2Q6ZN30 1099 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 FAM131BQ86XD5 332 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 DSELQ8IZU8 1212 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 DNAAF3Q8N9W5 541 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 NAT9Q9BTE0 207 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PRMT7Q9NVM4 692 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 UBAP1Q9NZ09 502 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 MYOCOSA0A1B0GUC4 107 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 TREHO43280 583 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 HNRNPRO43390 633 aaKnown RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 TFAP2AP05549 437 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 EPHA3P29320 983 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 CYLC2Q14093 348 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 B3GNT6Q6ZMB0 384 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ADAM32Q8TC27 787 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 P2RY11Q96G91 374 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PRICKLE1Q96MT3 831 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 OSMRQ99650 979 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 CPNE1Q99829 537 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ASB7Q9H672 318 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 BCAP29Q9UHQ4 241 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PCDHGB4Q9UN71 923 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PCDHGB5Q9Y5G0 923 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 CA12O43570 354 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 AMHP03971 560 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 SMIM18P0DKX4 95 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PIM1P11309 404 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 XRCC1P18887 633 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 MPSTP25325 297 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 ADORA2BP29275 332 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 SERPINB8P50452 374 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 THOP1P52888 689 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 RPL26P61254 145 aaKnown RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 USP46P62068 366 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 NAB1Q13506 487 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 C6orf52Q5T4I8 152 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 METTL21CQ5VZV1 264 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 MARVELD2Q8N4S9 558 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 OR52K1Q8NGK4 314 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 DNAJB3Q8WWF6 145 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 FAM149B1Q96BN6 582 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
CAPN1-208ENST00000527323 SLC4A5Q9BY07 1137 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 PREBQ9HCU5 417 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
CAPN1-208ENST00000527323 XIRP2A4UGR9 3374 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 ZNF865P0CJ78 1059 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 PHKA2P46019 1235 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 IRF9Q00978 393 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 INCA1Q0VD86 236 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 GK3PQ14409 553 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 TBC1D25Q3MII6 688 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 KLHDC10Q6PID8 442 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 TMEM110Q86TL2 294 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 BHLHE22Q8NFJ8 381 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 RCN3Q96D15 328 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 SCYL1Q96KG9 808 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 AGAP2Q99490 1192 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 NMRAL1Q9HBL8 299 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 MTMR10Q9NXD2 777 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 PTTG2Q9NZH5 202 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 TMCO1Q9UM00 188 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 GNEQ9Y223 722 aaKnown RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 IGKV6-21A0A0C4DH24 114 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 VILLO15195 856 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 ATP9BO43861 1147 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 PFDN1O60925 122 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms