RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RCAN1P53805 252 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MAP3K7CLP57077 242 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 RPL26P61254 145 aaKnown RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SSTP61278 116 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MRPS15P82914 257 aaKnown RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PPP2R2BQ00005 443 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 UBXN1Q04323 297 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SMARCB1Q12824 385 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 TBX2Q13207 712 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 UBE4AQ14139 1066 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 RCN2Q14257 317 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SEMA3AQ14563 771 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PLS1Q14651 629 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 CAMK4Q16566 473 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 NFE2Q16621 373 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PHKG1Q16816 387 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 IGSF11Q5DX21 431 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 HERC4Q5GLZ8 1057 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ZBTB41Q5SVQ8 909 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 AGBL2Q5U5Z8 902 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PIK3R6Q5UE93 754 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 NIPAL1Q6NVV3 410 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 LRIG3Q6UXM1 1119 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ZNF704Q6ZNC4 412 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ASRGL1Q7L266 308 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 TRPM8Q7Z2W7 1104 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PIGWQ7Z7B1 504 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 GPR149Q86SP6 731 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 NOP9Q86U38 636 aaKnown RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 IQCKQ8N0W5 287 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MMGT1Q8N4V1 131 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 AOPEPQ8N6M6 819 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ATP6V0D2Q8N8Y2 350 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 EXD1Q8NHP7 514 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SPATA18Q8TC71 538 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SLC22A8Q8TCC7 542 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 UCMAQ8WVF2 138 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 RUFY2Q8WXA3 655 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SGK3Q96BR1 496 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 DGCR14Q96DF8 476 aaKnown RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SGF29Q96ES7 293 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 LTV1Q96GA3 475 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 METTL2AQ96IZ6 378 aaKnown RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 TSGA13Q96PP4 275 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 USP28Q96RU2 1077 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SECISBP2Q96T21 854 aaKnown RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ELF4Q99607 663 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 TSG101Q99816 390 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 NEURL2Q9BR09 285 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MTMR12Q9C0I1 747 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 POFUT1Q9H488 388 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 C8orf33Q9H7E9 229 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 NEK6Q9HC98 313 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 WASH6PQ9NQA3 447 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SLC39A1Q9NY26 324 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 TAS2R7Q9NYW3 318 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 EMC3Q9P0I2 261 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 FOXJ2Q9P0K8 574 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SAMD15Q9P1V8 674 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MBD2Q9UBB5 411 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ASIC3Q9UHC3 531 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MOSPD1Q9UJG1 213 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 STX8Q9UNK0 236 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 DNM3Q9UQ16 869 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 TNNQ9UQP3 1299 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 IFT52Q9Y366 437 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 ANGPTL3Q9Y5C1 460 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 USH1CQ9Y6N9 552 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 MYO3BQ8WXR4 1341 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 PTPRTO14522 1441 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 NOS1P29475 1434 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 DAPK1P53355 1430 aa3.84□□□□□ -1.79
CLNS1A-209ENST00000527299 SYNJ2O15056 1496 aa3.84□□□□□ -1.8
CLNS1A-209ENST00000527299 TRPM1Q7Z4N2 1603 aa3.84□□□□□ -1.8
CLNS1A-209ENST00000527299 WNK3Q9BYP7 1800 aa3.84□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC163A0A0D9SF12 145 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 GOLGA8JA6NMD2 632 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 LACTBL1A8MY62 500 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 MIF4GDA9UHW6 222 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RSPH10B2B2RC85 870 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 B4E1Z4 1266 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 B5MCH6 92 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 TRDMT1O14717 391 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 APAF1O14727 1248 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 MAGEB3O15480 346 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 NDUFA2O43678 99 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 GPC4O75487 556 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ATP5HO75947 161 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 UFL1O94874 794 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT75O95678 551 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 DDX58O95786 925 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 SERPINC1P01008 464 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 HLA-DRAP01903 254 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 S100BP04271 92 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 CFIP05156 583 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT16P08779 473 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 IFIT2P09913 472 aaKnown RBP3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 ALOX5P09917 674 aa3.83□□□□□ -1.8
CLNS1A-209ENST00000527299 RSPH10BP0C881 870 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms