RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 WASH3PC4AMC7 463 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 K7ESF4 209 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 DDX3YO15523 660 aaKnown RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 DAPK3O43293 454 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 MFSD11O43934 449 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 CD160O95971 181 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 SRPRAP08240 638 aaKnown RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 COL9A1P20849 921 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 ETFBP38117 255 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 SULT2A1Q06520 285 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 POLD3Q15054 466 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 PEX26Q7Z412 305 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 TRMT11Q7Z4G4 463 aaKnown RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 CHPFQ8IZ52 775 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 NETO2Q8NC67 525 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 HES6Q96HZ4 224 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 CELF6Q96J87 481 aaKnown RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 RNF157Q96PX1 679 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 ATP13A1Q9HD20 1204 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 DONSONQ9NYP3 566 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 PACSIN2Q9UNF0 486 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-204ENST00000527149 HS3ST2Q9Y278 367 aa17.03■□□□□ 0.32
SMCO4-204ENST00000527149 CXorf51AA0A1B0GTR3 108 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 CCDC66A2RUB6 948 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 ATG13O75143 517 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 MT-CO1P00395 513 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 HLA-EP13747 358 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 WASP42768 502 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 SERINC3Q13530 473 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 PAFAH1B3Q15102 231 aaKnown RBP17.02■□□□□ 0.32
SMCO4-204ENST00000527149 CRY1Q16526 586 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 SLC9A4Q6AI14 798 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 KIAA1211LQ6NV74 962 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 SPOCD1Q6ZMY3 1216 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 PLD5Q8N7P1 536 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 EXD1Q8NHP7 514 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 FRS2Q8WU20 508 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 RNF25Q96BH1 459 aaPredicted RBP17.02■□□□□ 0.32
SMCO4-204ENST00000527149 RPL10LQ96L21 214 aaKnown RBP17.02■□□□□ 0.32
SMCO4-204ENST00000527149 SLC39A8Q9C0K1 460 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 PDFQ9HBH1 243 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 SPATA6Q9NWH7 488 aaPredicted RBP17.02■□□□□ 0.32
SMCO4-204ENST00000527149 SLCO3A1Q9UIG8 710 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 AMFRQ9UKV5 643 aa17.02■□□□□ 0.32
SMCO4-204ENST00000527149 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 EML5Q05BV3 1969 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 SHROOM3Q8TF72 1996 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 hCG_1818297A0A087WSY0 165 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 MIF4GDA9UHW6 222 aaKnown RBP17.01■□□□□ 0.31
SMCO4-204ENST00000527149 ATP9BO43861 1147 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 C7P10643 843 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 SRCP12931 536 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 HOXB2P14652 356 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 CCR3P51677 355 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 PPP2R5EQ16537 467 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 FNDC3BQ53EP0 1204 aaKnown RBP17.01■□□□□ 0.31
SMCO4-204ENST00000527149 EOGTQ5NDL2 527 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 DCAF12L1Q5VU92 463 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 SERPINA13PQ6UXR4 307 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 LINGO4Q6UY18 593 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 C1orf210Q8IVY1 113 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 SH2D3CQ8N5H7 860 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 LZTR1Q8N653 840 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 ZNF366Q8N895 744 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 SPON2Q9BUD6 331 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 MTG2Q9H4K7 406 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 ACTL7AQ9Y615 435 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 RAD54BQ9Y620 910 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 DMDP11532 3685 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 FANCMQ8IYD8 2048 aa17.01■□□□□ 0.31
SMCO4-204ENST00000527149 TTC34A8MYJ7 566 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 K7ERQ8 282 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 CBX4O00257 560 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 ZSCAN12O43309 604 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 SMAD6O43541 496 aaKnown RBP17■□□□□ 0.31
SMCO4-204ENST00000527149 GALR2O43603 387 aaPredicted RBP17■□□□□ 0.31
SMCO4-204ENST00000527149 KDELR3O43731 214 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 PTPN7P35236 360 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 CXCL12P48061 93 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 SERPINH1P50454 418 aaKnown RBP17■□□□□ 0.31
SMCO4-204ENST00000527149 PAPOLAP51003 745 aaKnown RBP17■□□□□ 0.31
SMCO4-204ENST00000527149 NUBP1P53384 320 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 GBE1Q04446 702 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 ADCY2Q08462 1091 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 E2F5Q15329 346 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 HNRNPA1L2Q32P51 320 aaKnown RBP17■□□□□ 0.31
SMCO4-204ENST00000527149 ZFYVE27Q5T4F4 411 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 IL31Q6EBC2 164 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 ARHGAP36Q6ZRI8 547 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 TRIM58Q8NG06 486 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 RBM41Q96IZ5 413 aaKnown RBP17■□□□□ 0.31
SMCO4-204ENST00000527149 SLC25A13Q9UJS0 675 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 PLA2G4CQ9UP65 541 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17■□□□□ 0.31
SMCO4-204ENST00000527149 WDR87Q6ZQQ6 2873 aa17■□□□□ 0.31
SMCO4-204ENST00000527149 PRAMEF11O60813 436 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms