RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 MOCOSQ96EN8 888 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 VPS39Q96JC1 886 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 CCDC28BQ9BUN5 200 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 NMRAL1Q9HBL8 299 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 LRRC4Q9HBW1 653 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 TCF7L2Q9NQB0 619 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 OXSMQ9NWU1 459 aa11.89□□□□□ -0.51
LINC01001-201ENST00000526704 MAGED2Q9UNF1 606 aaPredicted RBP11.89□□□□□ -0.51
LINC01001-201ENST00000526704 PIN4Q9Y237 131 aaKnown RBP11.89□□□□□ -0.51
LINC01001-201ENST00000526704 COL4A4P53420 1690 aaPredicted RBP11.89□□□□□ -0.51
LINC01001-201ENST00000526704 CASQ2O14958 399 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TIMM44O43615 452 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 ATP9BO43861 1147 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 H2AFYO75367 372 aaKnown RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 CAPN15O75808 1086 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 PIM1P11309 404 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 UQCRBP14927 111 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 NFKB1P19838 968 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 SERPINB6P35237 376 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 CSE1LP55060 971 aaKnown RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 LILRA4P59901 499 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TPI1P60174 286 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 XIAPP98170 497 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 MPP3Q13368 585 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 DGKDQ16760 1214 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 UBXN11Q5T124 520 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 KIAA0319Q5VV43 1072 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 KBTBD6Q86V97 674 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TOP6BLQ8N6T0 577 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 LENG8Q96PV6 779 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 APOL2Q9BQE5 337 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 IARS2Q9NSE4 1012 aaKnown RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 SSX2IPQ9Y2D8 614 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TBC1D30Q9Y2I9 924 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 RAD54BQ9Y620 910 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 NYNRINQ9P2P1 1898 aaKnown RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 GOLGA8QA0A0J9YX86 632 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 GOLGA8OA6NCC3 632 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 RRN3P2A6NIE6 340 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 GOLGA8NF8WBI6 632 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TK2O00142 265 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 AP1G2O75843 785 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 SBK3P0C264 359 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 PTPN1P18031 435 aaKnown RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 SERPINB5P36952 375 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 CCR10P46092 362 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TKTL1P51854 596 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 MAP3K7CLP57077 242 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 CCNA1P78396 465 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TRIP10Q15642 601 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 DUSP28Q4G0W2 176 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 PPM1LQ5SGD2 360 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 METTL21CQ5VZV1 264 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 TMEM151AQ8N4L1 468 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 GPRC5AQ8NFJ5 357 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 KCNK16Q96T55 309 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 SLC9A7Q96T83 725 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 ULBP1Q9BZM6 244 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
LINC01001-201ENST00000526704 C20orf96Q9NUD7 363 aaPredicted RBP11.88□□□□□ -0.51
LINC01001-201ENST00000526704 YJEFN3A6XGL0 299 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 ERI2A8K979 691 aaKnown RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 GOLGA8TH3BQL2 631 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 MATN2O00339 956 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 XPOTO43592 962 aaKnown RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 ZNF189O75820 626 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 SMIM10L2AP0DMW4 78 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 SMIM10L2BP0DMW5 78 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 IGFBP6P24592 240 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 PIK3R1P27986 724 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 NMBRP28336 390 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 PGGT1BP53609 377 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 AIF1P55008 147 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 POLE2P56282 527 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 DLG1Q12959 904 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 GRM3Q14832 879 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 PDZD4Q76G19 769 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 GPRIN1Q7Z2K8 1008 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 ZNF467Q7Z7K2 595 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 ARRDC4Q8NCT1 418 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 SREK1Q8WXA9 508 aaKnown RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 HDAC11Q96DB2 347 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 CNDP1Q96KN2 507 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 ACE2Q9BYF1 805 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 WDR55Q9H6Y2 383 aaPredicted RBP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 NEMP1O14524 444 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 TPH1P17752 444 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 RAB27AP51159 221 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 DAOAP59103 153 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 GALNT2Q10471 571 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 MED21Q13503 144 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 GRM2Q14416 872 aa11.87□□□□□ -0.51
LINC01001-201ENST00000526704 PCBP1Q15365 356 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC01001-201ENST00000526704 WSCD1Q658N2 575 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms