RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 USP33Q8TEY7 942 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 IFT81Q8WYA0 676 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 FGF14Q92915 247 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 LRRC45Q96CN5 670 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 PNKPQ96T60 521 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 FAM83CQ9BQN1 747 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 CEP41Q9BYV8 373 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 PAK5Q9P286 719 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 KLHL8Q9P2G9 620 aaPredicted RBP16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 VPS28Q9UK41 221 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 CLEC4EQ9ULY5 219 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 HPCAL4Q9UM19 191 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 LAMA3Q16787 3333 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 ANAPC1Q9H1A4 1944 aa16.21■□□□□ 0.19
CAPRIN1-204ENST00000526494 NOTCH4Q99466 2003 aa16.21■□□□□ 0.18
CAPRIN1-204ENST00000526494 A0A0A0MRY4 1105 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 CBX4O00257 560 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 HOXC11O43248 304 aaPredicted RBP16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 KDELR3O43731 214 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 PRAMEF11O60813 436 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 NEBLO76041 1014 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 CCNB1P14635 433 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 PSMC3P17980 439 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 MCM3P25205 808 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 PTPN3P26045 913 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 GDI1P31150 447 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 RPL21P46778 160 aaKnown RBP16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 FCHO2Q0JRZ9 810 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 LMAN2Q12907 356 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 HTR4Q13639 388 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 P3H1Q32P28 736 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 RNF43Q68DV7 783 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 C4orf22Q6V702 233 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 LEKR1Q6ZMV7 388 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 CPA6Q8N4T0 437 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 NAT16Q8N8M0 369 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 ZNF557Q8N988 423 aaPredicted RBP16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 CASKIN2Q8WXE0 1202 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 RUBCNQ92622 972 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 SNF8Q96H20 258 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 SPATA13Q96N96 652 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 FEM1AQ9BSK4 669 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 TRMT61BQ9BVS5 477 aaKnown RBP16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 ACE2Q9BYF1 805 aaPredicted RBP16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 PARD6BQ9BYG5 372 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 GDF3Q9NR23 364 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 FAM114A2Q9NRY5 505 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 NUMBLQ9Y6R0 609 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 PRRC2BQ5JSZ5 2229 aaKnown RBP16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 TRANK1O15050 2925 aa16.2■□□□□ 0.18
CAPRIN1-204ENST00000526494 OPHN1O60890 802 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 TUBBP07437 444 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 CD70P32970 193 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 IFI35P80217 286 aaPredicted RBP16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 TNK2Q07912 1038 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ZBTB17Q13105 803 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 NR1H3Q13133 447 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 TRADDQ15628 312 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ANKRD20A2Q5SQ80 823 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ANKRD20A1Q5TYW2 823 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ANKRD20A3Q5VUR7 823 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 PID1Q7Z2X4 250 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ZNF567Q8N184 647 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 FATE1Q969F0 183 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 AGAP3Q96P47 875 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 XPO6Q96QU8 1125 aaKnown RBP16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 VAT1Q99536 393 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 RPP25Q9BUL9 199 aaKnown RBP16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 SLC2A11Q9BYW1 496 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ECT2Q9H8V3 914 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 HPS4Q9NQG7 708 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 ABCB8Q9NUT2 735 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 RBM22Q9NW64 420 aaKnown RBP eCLIP16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 TRHDEQ9UKU6 1024 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 OR51B4Q9Y5P0 310 aa16.19■□□□□ 0.18
CAPRIN1-204ENST00000526494 C2CD4DB7Z1M9 353 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 BHMG1C9JSJ3 638 aaPredicted RBP16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 ANHXE9PGG2 379 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 CHADO15335 359 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 SNAP91O60641 907 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 GLDCP23378 1020 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 RENBPP51606 427 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 DRG2P55039 364 aaKnown RBP16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 VSNL1P62760 191 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 CALCOCO2Q13137 446 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 CUL1Q13616 776 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 SLC12A1Q13621 1099 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 RUNX3Q13761 415 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 HNRNPDQ14103 355 aaKnown RBP16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 HLTFQ14527 1009 aaKnown RBP eCLIP16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 LEXMQ3ZCV2 418 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 TEX44Q53QW1 395 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 TMCO4Q5TGY1 634 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 MARC1Q5VT66 337 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 IZUMO3Q5VZ72 239 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 ITPRIPL1Q6GPH6 555 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 ASTLQ6HA08 431 aaPredicted RBP16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 APCDD1Q8J025 514 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 DCAF4L2Q8NA75 395 aa16.18■□□□□ 0.18
CAPRIN1-204ENST00000526494 BBOF1Q8ND07 529 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms