RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 RMND1Q9NWS8 449 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 ZFR2Q9UPR6 939 aaKnown RBP14.68□□□□□ -0.06
CPSF1-201ENST00000526271 HS3ST4Q9Y661 456 aa14.68□□□□□ -0.06
CPSF1-201ENST00000526271 A0A1B0GVM2 712 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 TCAF2A6NFQ2 919 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 F5H5T6 163 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 MCF2LO15068 1137 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 YKT6O15498 198 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 SMAD6O43541 496 aaKnown RBP14.67□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF821O75541 412 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-201ENST00000526271 GRAP2O75791 330 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 SRCP12931 536 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 PLA2G2AP14555 144 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 DGKAP23743 735 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 ARRB1P49407 418 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-201ENST00000526271 YWHAZP63104 245 aaKnown RBP14.67□□□□□ -0.06
CPSF1-201ENST00000526271 KCNH2Q12809 1159 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF284Q2VY69 593 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 ALFQ53S48 1182 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 TPRG1LQ5T0D9 272 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 SH2D3CQ8N5H7 860 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 CHST14Q8NCH0 376 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 OR2A12Q8NGT7 310 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 DHTKD1Q96HY7 919 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-201ENST00000526271 FCRL3Q96P31 734 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-201ENST00000526271 TMPRSS4Q9NRS4 437 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 GPR27Q9NS67 375 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 VANGL2Q9ULK5 521 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 AK5Q9Y6K8 562 aa14.67□□□□□ -0.06
CPSF1-201ENST00000526271 SYNJ2BP-COX16A0A087WUM0 186 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 TYW5A2RUC4 315 aaKnown RBP14.66□□□□□ -0.06
CPSF1-201ENST00000526271 P4HA2O15460 535 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 SLC7A4O43246 635 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 LETM1O95202 739 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-201ENST00000526271 MOCS3O95396 460 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 APOEP02649 317 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 GLDCP23378 1020 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 HNF1BP35680 557 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 MARSP56192 900 aaKnown RBP14.66□□□□□ -0.06
CPSF1-201ENST00000526271 STX17P56962 302 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 CLDN2P57739 230 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 ILKQ13418 452 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 SLC12A1Q13621 1099 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 MEA1Q16626 185 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D25Q3MII6 688 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 CCDC40Q4G0X9 1142 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 OLFML1Q6UWY5 402 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 GCNT7Q6ZNI0 430 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 PRPF39Q86UA1 669 aaKnown RBP14.66□□□□□ -0.06
CPSF1-201ENST00000526271 IQCHQ86VS3 1027 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 OR13H1Q8NG92 308 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 SMARCE1Q969G3 411 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 HIC2Q96JB3 615 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 SEMA4CQ9C0C4 833 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 KDM4CQ9H3R0 1056 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 THAP9Q9H5L6 903 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.66□□□□□ -0.06
CPSF1-201ENST00000526271 COX16Q9P0S2 106 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF212Q9UDV6 495 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 CLCA2Q9UQC9 943 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 DMTF1Q9Y222 760 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 TBC1D30Q9Y2I9 924 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 CEP83Q9Y592 693 aa14.66□□□□□ -0.06
CPSF1-201ENST00000526271 BSNQ9UPA5 3926 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 A0A1W2PQU0 124 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 PMS2P1A4D2B8 440 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 RAD51BO15315 384 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 SLC31A1O15431 190 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 RNGTTO60942 597 aaKnown RBP14.65□□□□□ -0.06
CPSF1-201ENST00000526271 MT-CO3P00414 261 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 ERBB2P04626 1255 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 CDK4P11802 303 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 ACADSBP45954 432 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 CCDC173Q0VFZ6 552 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 ZNF211Q13398 564 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-201ENST00000526271 MORC3Q14149 939 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 RNF219Q5W0B1 726 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-201ENST00000526271 SEL1L3Q68CR1 1132 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 DPY19L2P1Q6NXN4 242 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 FAM183BPQ6ZVS7 135 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 OR4C6Q8NH72 309 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 NELFBQ8WX92 580 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 OR8D1Q8WZ84 308 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 FGF11Q92914 225 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 SKA1Q96BD8 255 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 BMFQ96LC9 184 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 UBE2TQ9NPD8 197 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-201ENST00000526271 DDIT4Q9NX09 232 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 KLF15Q9UIH9 416 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 PNMA8BQ9ULN7 279 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-201ENST00000526271 CTNND2Q9UQB3 1225 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 HS3ST2Q9Y278 367 aa14.65□□□□□ -0.06
CPSF1-201ENST00000526271 HECTD1Q9ULT8 2610 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 A0A0D9SEW6 157 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 PRAMEF26H0Y7S4 382 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 TK2O00142 265 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 CAPN9O14815 690 aa14.64□□□□□ -0.07
CPSF1-201ENST00000526271 SART1O43290 800 aaKnown RBP14.64□□□□□ -0.07
CPSF1-201ENST00000526271 PAGE1O75459 146 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms