RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 BPIFB1Q8TDL5 484 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 SSC4DQ8WTU2 575 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 GAREM1Q9H706 876 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 IL21RQ9HBE5 538 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 VAT1LQ9HCJ6 419 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 MMP17Q9ULZ9 603 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 BTBD3Q9Y2F9 522 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 PMF1-BGLAPU3KQ54 211 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 APCP25054 2843 aa7.55□□□□□ -1.2
NEDD8-203ENST00000524927 WIPF3A6NGB9 483 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ARL5CA6NH57 179 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 PRRG1O14668 218 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ZBTB5O15062 677 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 NRP2O60462 931 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 CUTAO60888 179 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 RECQL4O94761 1208 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 CELA3BP08861 270 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 GJA1P17302 382 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 CASRP41180 1078 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 MATKP42679 507 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 GPR15P49685 360 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 MCM2P49736 904 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ADKP55263 362 aaKnown RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ERVPABLB-1P60509 514 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ELAVL2Q12926 359 aaKnown RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 IFIT1BQ5T764 474 aaKnown RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 HES3Q5TGS1 186 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 FAM171A1Q5VUB5 890 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 EFCAB12Q6NXP0 572 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 TRMT10BQ6PF06 316 aaKnown RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 TTC30AQ86WT1 665 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 CEP57Q86XR8 500 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 SLC41A1Q8IVJ1 513 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 CNNM3Q8NE01 707 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 TSPEARQ8WU66 669 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 FATE1Q969F0 183 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ZNF512Q96ME7 567 aaPredicted RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 BOLA2Q9H3K6 86 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 ASAH2Q9NR71 780 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 SAE1Q9UBE0 346 aaPredicted RBP7.54□□□□□ -1.2
NEDD8-203ENST00000524927 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 TBX20Q9UMR3 447 aa7.54□□□□□ -1.2
NEDD8-203ENST00000524927 NFASCO94856 1347 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 KIAA1549LQ6ZVL6 1849 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 CEP192Q8TEP8 1941 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 CSDE1O75534 798 aaKnown RBP7.53□□□□□ -1.2
NEDD8-203ENST00000524927 IFIT2P09913 472 aaKnown RBP7.53□□□□□ -1.2
NEDD8-203ENST00000524927 MYL4P12829 197 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 BMP7P18075 431 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ATP5JP18859 108 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 AKAP5P24588 427 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ELF1P32519 619 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 SLC16A1P53985 500 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 NRG3P56975 720 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ANO4Q32M45 955 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ARL13BQ3SXY8 428 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 SYCP2LQ5T4T6 812 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 GAREM2Q75VX8 874 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 DEFB119Q8N690 84 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 TRIML1Q8N9V2 468 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ZNF461Q8TAF7 563 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 DYDC2Q96IM9 177 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ZNF668Q96K58 619 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-203ENST00000524927 FAM20AQ96MK3 541 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 SLC25A18Q9H1K4 315 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 HPS4Q9NQG7 708 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 BCCIPQ9P287 314 aaKnown RBP eCLIP7.53□□□□□ -1.2
NEDD8-203ENST00000524927 TUBD1Q9UJT1 453 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 ANAPC4Q9UJX5 808 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 FBXO10Q9UK96 956 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 CDC42EP3Q9UKI2 254 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 DNM3Q9UQ16 869 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 CDY1Q9Y6F8 540 aa7.53□□□□□ -1.2
NEDD8-203ENST00000524927 A0A0G2JNJ9 132 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 A0A1B0GTW7 788 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 OTOL1A6NHN0 477 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 VSTM5A8MXK1 200 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 AP1G1O43747 822 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 DIAPH2O60879 1101 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 LUC7L3O95232 432 aaKnown RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 LPOP22079 712 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 GNALP38405 381 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 CLDN6P56747 220 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 ANTXR2P58335 489 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 HLA-BQ31612 363 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 DCAF6Q58WW2 860 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 CCDC178Q5BJE1 867 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 WDR45BQ5MNZ6 344 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 KRTAP5-3Q6L8H2 238 aa7.52□□□□□ -1.21
NEDD8-203ENST00000524927 EPM2AIP1Q7L775 607 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 CLASRPQ8N2M8 674 aaKnown RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 ZNF564Q8TBZ8 553 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 ZNF419Q96HQ0 510 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-203ENST00000524927 SIGLEC10Q96LC7 697 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms