RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 STARD3NLO95772 234 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 CD63P08962 238 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 RFPL3SP0C7P2 107 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ZKSCAN1P17029 563 aaPredicted RBP1.96□□□□□ -2.1
CD44-212ENST00000524922 TFEBP19484 476 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 TBXAS1P24557 533 aaPredicted RBP1.96□□□□□ -2.1
CD44-212ENST00000524922 MST1P26927 711 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 STAT6P42226 847 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 AMPHP49418 695 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 CACNB3P54284 484 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 SLC12A2P55011 1212 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 MTA1Q13330 715 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 SEMA5AQ13591 1074 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 KEAP1Q14145 624 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 GBX1Q14549 363 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 GRM3Q14832 879 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 TNIP1Q15025 636 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 PRTGQ2VWP7 1150 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 KIAA1755Q5JYT7 1200 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ZNF324BQ6AW86 544 aaPredicted RBP1.96□□□□□ -2.1
CD44-212ENST00000524922 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 PRR5LQ6MZQ0 368 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 PIK3AP1Q6ZUJ8 805 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 C2CD5Q86YS7 1000 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 LAS2Q8IYD9 372 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 CLASRPQ8N2M8 674 aaKnown RBP1.96□□□□□ -2.1
CD44-212ENST00000524922 RNF152Q8N8N0 203 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ZFPM2Q8WW38 1151 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ASB12Q8WXK4 309 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ERO1AQ96HE7 468 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 URB1-AS1Q96HZ7 61 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 THOC3Q96J01 351 aaKnown RBP1.96□□□□□ -2.1
CD44-212ENST00000524922 ZNF333Q96JL9 665 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 SNX22Q96L94 193 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 WDR83Q9BRX9 315 aaKnown RBP1.96□□□□□ -2.1
CD44-212ENST00000524922 LRRC27Q9C0I9 530 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 SLC25A32Q9H2D1 315 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 CDCP1Q9H5V8 836 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ARL8BQ9NVJ2 186 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 SELENONQ9NZV5 590 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ITGB1BP2Q9UKP3 347 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 PCDHB2Q9Y5E7 798 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ZDBF2Q9HCK1 2354 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 CEMIPQ8WUJ3 1361 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ITGB4P16144 1822 aa1.96□□□□□ -2.1
CD44-212ENST00000524922 ZNF541Q9H0D2 1346 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 PRUNE2Q8WUY3 3088 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 GXYLT2A0PJZ3 443 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 CLCA1A8K7I4 914 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 LACTBL1A8MY62 500 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 GOLIM4O00461 696 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 TNFRSF13BO14836 293 aaPredicted RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 UGDHO60701 494 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 SNX2O60749 519 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 INMTO95050 263 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 CELF2O95319 508 aaKnown RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 IFNA2P01563 188 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 T-ENOLP0DO92 83 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 MATN1P21941 496 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 PEX2P28328 305 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 CHRNA5P30532 468 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 SLC5A2P31639 672 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 ATICP31939 592 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 AGTR2P50052 363 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 DGKQP52824 942 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 HUNKP57058 714 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 CNGA3Q16281 694 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 MINDY4Q4G0A6 757 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 ZNF628Q5EBL2 1059 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 TMEM196Q5HYL7 178 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 ACSM6Q6P461 480 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 C16orf89Q6UX73 402 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 GPSM1Q86YR5 675 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 RHPN2Q8IUC4 686 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 SPATA2LQ8IUW3 424 aaPredicted RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 FSTL5Q8N475 847 aaPredicted RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 CNBD1Q8NA66 436 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 WFIKKN2Q8TEU8 576 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 AKAP1Q92667 903 aaKnown RBP eCLIP1.95□□□□□ -2.1
CD44-212ENST00000524922 FAM122AQ96E09 287 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 SNX27Q96L92 541 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 STRBPQ96SI9 672 aaKnown RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 MEIS3Q99687 375 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 SENP7Q9BQF6 1050 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 TMEM204Q9BSN7 226 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 C1QTNF1Q9BXJ1 281 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 BTBD1Q9H0C5 482 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 MAP6D1Q9H9H5 199 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 ZNF287Q9HBT7 754 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 CD93Q9NPY3 652 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 GJB4Q9NTQ9 266 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 DECR2Q9NUI1 292 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 MDFICQ9P1T7 246 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 NOB1Q9ULX3 412 aaKnown RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 ICKQ9UPZ9 632 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 HEMK1Q9Y5R4 338 aaPredicted RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 ZNF646O15015 1829 aaPredicted RBP1.95□□□□□ -2.1
CD44-212ENST00000524922 NPC1L1Q9UHC9 1359 aa1.95□□□□□ -2.1
CD44-212ENST00000524922 ANKRD11Q6UB99 2663 aaPredicted RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 TJP1Q07157 1748 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms