RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 COPS5Q92905 334 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 MOCOSQ96EN8 888 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 DNAJC1Q96KC8 554 aaKnown RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ACE2Q9BYF1 805 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 IL22Q9GZX6 179 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 WDR41Q9HAD4 459 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 PREBQ9HCU5 417 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 CASS4Q9NQ75 786 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 IRAK4Q9NWZ3 460 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 APPL1Q9UKG1 709 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 CNOT11Q9UKZ1 510 aaKnown RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 MYO18AQ92614 2054 aaKnown RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 PIGNO95427 931 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ATP6V1B1P15313 513 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 MATKP42679 507 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ABCG1P45844 678 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 CCR10P46092 362 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 GRIA4P48058 902 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 IGBP1P78318 339 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 SLC25A52Q3SY17 297 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ARL13AQ5H913 290 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ZNF484Q5JVG2 852 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 SH2D4BQ5SQS7 431 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 IYDQ6PHW0 289 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 PDCD6IPQ8WUM4 868 aaKnown RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 USP13Q92995 863 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 KLHL32Q96NJ5 620 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 PRPF18Q99633 342 aaKnown RBP11.72□□□□□ -0.53
PTPRK-217ENST00000524534 C1QTNF1Q9BXJ1 281 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 NUF2Q9BZD4 464 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 CXCL16Q9H2A7 254 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ZBTB26Q9HCK0 441 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 BFARQ9NZS9 450 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 VTI1BQ9UEU0 232 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 ZDHHC2Q9UIJ5 367 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 HES2Q9Y543 173 aa11.72□□□□□ -0.53
PTPRK-217ENST00000524534 MYOCOSA0A1B0GUC4 107 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 SLCO1B7G3V0H7 640 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 CFLARO15519 480 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 HCRTO43612 131 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 TSPAN1O60635 241 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 USP12O75317 370 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 CABYRO75952 493 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 ENO3P13929 434 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-217ENST00000524534 INSRRP14616 1297 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 ADORA2BP29275 332 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 ACADSBP45954 432 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 SULT1E1P49888 294 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 NR1H2P55055 460 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 HPCAP84074 193 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 MPP3Q13368 585 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 ADRM1Q16186 407 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 OTUD1Q5VV17 481 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-217ENST00000524534 TP53INP2Q8IXH6 220 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 DEFB106AQ8N104 65 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 OR6B3Q8NGW1 331 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 VPS39Q96JC1 886 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 HSFY1Q96LI6 401 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 PPP1R36Q96LQ0 422 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 CATSPER2Q96P56 530 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 EFCAB1Q9HAE3 211 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 TMPRSS4Q9NRS4 437 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 PPP1R1BQ9UD71 204 aaPredicted RBP11.71□□□□□ -0.53
PTPRK-217ENST00000524534 G3BP2Q9UN86 482 aaKnown RBP11.71□□□□□ -0.53
PTPRK-217ENST00000524534 ANKRD6Q9Y2G4 727 aa11.71□□□□□ -0.53
PTPRK-217ENST00000524534 ARHGAP10A1A4S6 786 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 CCDC160A6NGH7 325 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 TK2O00142 265 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 DCLK1O15075 740 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 PTPN3P26045 913 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 HADHAP40939 763 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 GRM5P41594 1212 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 DPYSQ14117 519 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 TMEM198Q66K66 360 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 KCTD11Q693B1 232 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 BNIPLQ7Z465 357 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 KCNMB4Q86W47 210 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 LSMEM2Q8N112 164 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 GALNT4Q8N4A0 578 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 CNTD1Q8N815 330 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 ADAM32Q8TC27 787 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 EVPLQ92817 2033 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 MFSD3Q96ES6 412 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 TIMMDC1Q9NPL8 285 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 ACSS2Q9NR19 701 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 GALNT8Q9NY28 637 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 KLHL8Q9P2G9 620 aaPredicted RBP11.71□□□□□ -0.54
PTPRK-217ENST00000524534 CIDEBQ9UHD4 219 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 CDYLQ9Y232 598 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 DERAQ9Y315 318 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
PTPRK-217ENST00000524534 TCAF2A6NFQ2 919 aa11.7□□□□□ -0.54
PTPRK-217ENST00000524534 H0YJX3 145 aa11.7□□□□□ -0.54
PTPRK-217ENST00000524534 STX16-NPEPL1H3BU86 382 aa11.7□□□□□ -0.54
PTPRK-217ENST00000524534 KCNK1O00180 336 aa11.7□□□□□ -0.54
PTPRK-217ENST00000524534 HNRNPRO43390 633 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms