RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	B4GALT5	O43286	388 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	PIGN	O95427	931 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	LTF	P02788	710 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	CYP2C8	P10632	490 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	SCNN1A	P37088	669 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	DPP6	P42658	865 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	GRIA4	P48058	902 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	IFRD2	Q12894	506 aa	Predicted RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	PDAP1	Q13442	181 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	IKBKE	Q14164	716 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRIM25	Q14258	630 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	KYAT1	Q16773	422 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	ARL13A	Q5H913	290 aa	Predicted RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	SH3D19	Q5HYK7	790 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC26A9	Q7LBE3	791 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRIM50	Q86XT4	487 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	RNF168	Q8IYW5	571 aa	Predicted RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	RNF148	Q8N7C7	305 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC35F5	Q8WV83	523 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	CNKSR2	Q8WXI2	1034 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMA16	Q96EY4	203 aa	Known RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	P2RY11	Q96G91	374 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	ATXN7L3B	Q96GX2	97 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMEM79	Q9BSE2	394 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	TUBA8	Q9NY65	449 aa	Predicted RBP	10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	SH3GLB1	Q9Y371	365 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	RNF11	Q9Y3C5	154 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	SH3BP1	Q9Y3L3	701 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	USP3	Q9Y6I4	520 aa		10.45	□□□□□ -0.74
SPIDR-225	ENST00000524141	GRID2	O43424	1007 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	BMP10	O95393	424 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	AMH	P03971	560 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	MCF2	P10911	925 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	YY1	P25490	414 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	DNAJB1	P25685	340 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	GMPR	P36959	345 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ESRRG	P62508	458 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	RBP5	P82980	135 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	IRF9	Q00978	393 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	RHD	Q02161	417 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRAP1	Q12931	704 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	MPP3	Q13368	585 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMEM132D	Q14C87	1099 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	MAPRE2	Q15555	327 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	NRF1	Q16656	503 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	IL23R	Q5VWK5	629 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	METTL7B	Q6UX53	244 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMEM135	Q86UB9	458 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	PSTK	Q8IV42	348 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	C12orf29	Q8N999	325 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	SMYD1	Q8NB12	490 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	C12orf42	Q96LP6	360 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TEPSIN	Q96N21	525 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	FCRL3	Q96P31	734 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	OSBPL6	Q9BZF3	934 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	CLK4	Q9HAZ1	481 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	FAIM	Q9NVQ4	179 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	NSMCE4A	Q9NXX6	385 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ADA2	Q9NZK5	511 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	IPO11	Q9UI26	975 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TLK1	Q9UKI8	766 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	VANGL2	Q9ULK5	521 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC8A2	Q9UPR5	921 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	EP400	Q96L91	3159 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRPC5OS	A6NMA1	111 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	FAM155A	B1AL88	458 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	COQ9	O75208	318 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ATP6V1G1	O75348	118 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TGFB3	P10600	412 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	GOT1	P17174	413 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	PTPN1	P18031	435 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	MBTD1	Q05BQ5	628 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	STX5	Q13190	355 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ANO4	Q32M45	955 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	DUS1L	Q6P1R4	473 aa	Known RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	CES3	Q6UWW8	571 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	STRADA	Q7RTN6	431 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	CDR2L	Q86X02	465 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZNF280C	Q8ND82	737 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ATP6V1E2	Q96A05	226 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	PPP1R36	Q96LQ0	422 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	ANKRD60	Q9BZ19	345 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	TASP1	Q9H6P5	420 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	COQ10B	Q9H8M1	238 aa		10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.44	□□□□□ -0.74
SPIDR-225	ENST00000524141	MAGEB16	A2A368	324 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	C7orf72	A4D263	438 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TCAF2	A6NFQ2	919 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	MFSD11	O43934	449 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	DDHD2	O94830	711 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	YBX3	P16989	372 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	TFE3	P19532	575 aa	Predicted RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	SMAD1	Q15797	465 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	IRAK1BP1	Q5VVH5	260 aa		10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	PATL1	Q86TB9	770 aa	Known RBP	10.43	□□□□□ -0.74
SPIDR-225	ENST00000524141	NT5DC4	Q86YG4	428 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms