RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ACCSLQ4AC99 568 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 RABGAP1LQ5R372 815 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 CDCP2Q5VXM1 449 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 FBXL22Q6P050 247 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 Q6ZVU0 165 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 TMEM110Q86TL2 294 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 FMR1NBQ8N0W7 255 aaPredicted RBP23.37■■□□□ 1.33
PVT1-218ENST00000523328 ZNF248Q8NDW4 579 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 HIC2Q96JB3 615 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 LGMNQ99538 433 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 FEM1AQ9BSK4 669 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 CAAP1Q9H8G2 361 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 GDPD2Q9HCC8 539 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 KLHL11Q9NVR0 708 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 SLC25A13Q9UJS0 675 aa23.37■■□□□ 1.33
PVT1-218ENST00000523328 THEGLP0DJG4 465 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 IRAK1P51617 712 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 KCNMA1Q12791 1236 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 TAF5Q15542 800 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 MEA1Q16626 185 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 PIP5KL1Q5T9C9 394 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 CEP63Q96MT8 703 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 MYOCQ99972 504 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 THAP9Q9H5L6 903 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 SLC12A6Q9UHW9 1150 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 OR51B4Q9Y5P0 310 aa23.36■■□□□ 1.33
PVT1-218ENST00000523328 ERVH48-1M5A8F1 160 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 SLC31A1O15431 190 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 CKMT1AP12532 417 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 PRLRP16471 622 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 PCBP4P57723 403 aaKnown RBP23.35■■□□□ 1.33
PVT1-218ENST00000523328 CETN1Q12798 172 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 CCDC40Q4G0X9 1142 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 SH2D3CQ8N5H7 860 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 EHBP1Q8NDI1 1231 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 NAF1Q96HR8 494 aaKnown RBP23.35■■□□□ 1.33
PVT1-218ENST00000523328 ZNF578Q96N58 590 aaPredicted RBP23.35■■□□□ 1.33
PVT1-218ENST00000523328 MED15Q96RN5 788 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 TRPM6Q9BX84 2022 aa23.35■■□□□ 1.33
PVT1-218ENST00000523328 COL27A1Q8IZC6 1860 aaPredicted RBP23.34■■□□□ 1.33
PVT1-218ENST00000523328 FFAR2O15552 330 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 OPA1O60313 960 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 DXOO77932 396 aaKnown RBP23.34■■□□□ 1.33
PVT1-218ENST00000523328 MPOP05164 745 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 CTSLP07711 333 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 SLC2A3P11169 496 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 ZNF18P17022 549 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 TMC6Q7Z403 805 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 KLK6Q92876 244 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 RPRD1AQ96P16 312 aaPredicted RBP23.34■■□□□ 1.33
PVT1-218ENST00000523328 PPP1R9BQ96SB3 815 aa23.34■■□□□ 1.33
PVT1-218ENST00000523328 LY6G6EA0A0G2JKS1 128 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 A0A1W2PQU0 124 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 PIAS2O75928 621 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 CCR1P32246 355 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 AUHQ13825 339 aaKnown RBP23.33■■□□□ 1.33
PVT1-218ENST00000523328 ZNF284Q2VY69 593 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 HS1BP3Q53T59 392 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 NEK5Q6P3R8 708 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 OR13H1Q8NG92 308 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 ZNF606Q8WXB4 792 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 SLC2A13Q96QE2 648 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 FAM204AQ9H8W3 233 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 FZD3Q9NPG1 666 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 DDIT4Q9NX09 232 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 VPS28Q9UK41 221 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 VANGL2Q9ULK5 521 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 HS3ST2Q9Y278 367 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 U3KQA8 63 aa23.33■■□□□ 1.33
PVT1-218ENST00000523328 SYNJ2BP-COX16A0A087WUM0 186 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 PSMA7O14818 248 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 BNIP3LO60238 219 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 LETM1O95202 739 aaPredicted RBP23.32■■□□□ 1.32
PVT1-218ENST00000523328 SMC2O95347 1197 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 SRCP12931 536 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 KRT5P13647 590 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 CD44P16070 742 aaKnown RBP23.32■■□□□ 1.32
PVT1-218ENST00000523328 GABREP78334 506 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 CDK17Q00537 523 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 PDCLQ13371 301 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 HORMAD1Q86X24 394 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 DEFB106AQ8N104 65 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 SLC22A18ASQ8N1D0 253 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 SMARCE1Q969G3 411 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 ARRDC3Q96B67 414 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 DHTKD1Q96HY7 919 aaPredicted RBP23.32■■□□□ 1.32
PVT1-218ENST00000523328 APOLD1Q96LR9 279 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 NOX5Q96PH1 765 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 DEPDC7Q96QD5 511 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 GTPBP4Q9BZE4 634 aaKnown RBP23.32■■□□□ 1.32
PVT1-218ENST00000523328 CPNE5Q9HCH3 593 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 ACP6Q9NPH0 428 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 COX16Q9P0S2 106 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 TBC1D30Q9Y2I9 924 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 ATP6V1DQ9Y5K8 247 aa23.32■■□□□ 1.32
PVT1-218ENST00000523328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.31■■□□□ 1.32
PVT1-218ENST00000523328 CAPN8A6NHC0 703 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 RNF103O00237 685 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 MED7O43513 233 aa23.31■■□□□ 1.32
PVT1-218ENST00000523328 USP12O75317 370 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms