RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ALKBH5Q6P6C2 394 aaKnown RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 MMAAQ8IVH4 418 aaKnown RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 PYROXD2Q8N2H3 581 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 STK40Q8N2I9 435 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 HSPA12BQ96MM6 686 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 SPON2Q9BUD6 331 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 PABPC3Q9H361 631 aaKnown RBP16.79■□□□□ 0.28
PABPC1-221ENST00000522720 TMEM248Q9NWD8 314 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 DLL3Q9NYJ7 618 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 MYO1AQ9UBC5 1043 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 DCHS1Q96JQ0 3298 aa16.79■□□□□ 0.28
PABPC1-221ENST00000522720 LAMA1P25391 3075 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 NYNRINQ9P2P1 1898 aaKnown RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 GDF9O60383 454 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 RNF8O76064 485 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 ETFBP38117 255 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 MAPKAPK2P49137 400 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 SLC20A2Q08357 652 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 SFSWAPQ12872 951 aaKnown RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 SEMA3BQ13214 749 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 AASDHQ4L235 1098 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 SYCP2LQ5T4T6 812 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 TCEAL6Q6IPX3 200 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 USP30Q70CQ3 517 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 FAM124AQ86V42 546 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 ARFGAP1Q8N6T3 406 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 NETO1Q8TDF5 533 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 TCEAL3Q969E4 200 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 DNAJC7Q99615 494 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 ACE2Q9BYF1 805 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 PCED1AQ9H1Q7 454 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 RXFP3Q9NSD7 469 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 NDFIP2Q9NV92 336 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 EVLQ9UI08 416 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 CDV3Q9UKY7 258 aaKnown RBP16.78■□□□□ 0.28
PABPC1-221ENST00000522720 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
PABPC1-221ENST00000522720 METTL12A8MUP2 240 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 PATE3B3GLJ2 98 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 CBX4O00257 560 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 MID1O15344 667 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 ZMPSTE24O75844 475 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 TPM1P09493 284 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 SRCP12931 536 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 GLDCP23378 1020 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 EPHB2P29323 1055 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 SLC8A1P32418 973 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 ACSL1P33121 698 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 EIF4A3P38919 411 aaKnown RBP16.77■□□□□ 0.28
PABPC1-221ENST00000522720 CLCN6P51797 869 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 IRX4P78413 519 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 PUM1Q14671 1186 aaKnown RBP eCLIP16.77■□□□□ 0.28
PABPC1-221ENST00000522720 ACAP1Q15027 740 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 WDR45BQ5MNZ6 344 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 CCDC122Q5T0U0 273 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 SARM1Q6SZW1 724 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 ATP11CQ8NB49 1132 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 DNASE2BQ8WZ79 361 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 EPAS1Q99814 870 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 NCAPGQ9BPX3 1015 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 BTBD1Q9H0C5 482 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 THAP2Q9H0W7 228 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 MAGEH1Q9H213 219 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 SGK2Q9HBY8 427 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 ATP13A1Q9HD20 1204 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 DNAI1Q9UI46 699 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 NENFQ9UMX5 172 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 NCKAP1Q9Y2A7 1128 aa16.77■□□□□ 0.28
PABPC1-221ENST00000522720 CNOT1A5YKK6 2376 aaKnown RBP16.77■□□□□ 0.27
PABPC1-221ENST00000522720 KNL1Q8NG31 2342 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 CXorf51AA0A1B0GTR3 108 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 EIF3CLB5ME19 914 aaKnown RBP16.76■□□□□ 0.27
PABPC1-221ENST00000522720 K7ERQ8 282 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 MCF2LO15068 1137 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 ADH1BP00325 375 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 CYP1A2P05177 515 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 C5AR1P21730 350 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 MIPP30301 263 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 HTR7P34969 479 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 ACVRL1P37023 503 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 LIMK1P53667 647 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 DUOXA1Q1HG43 343 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 TSR1Q2NL82 804 aaKnown RBP16.76■□□□□ 0.27
PABPC1-221ENST00000522720 TRIM61Q5EBN2 209 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 ERMARDQ5T6L9 678 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 IL31Q6EBC2 164 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 RETSATQ6NUM9 610 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 SLC23A3Q6PIS1 610 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 LINGO4Q6UY18 593 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 Q6ZVU0 165 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 RABEPKQ7Z6M1 372 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 DSG4Q86SJ6 1040 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 RGL4Q8IZJ4 473 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 RTL3Q8N8U3 475 aaKnown RBP16.76■□□□□ 0.27
PABPC1-221ENST00000522720 CEP76Q8TAP6 659 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 GANCQ8TET4 914 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 OR8D1Q8WZ84 308 aa16.76■□□□□ 0.27
PABPC1-221ENST00000522720 EIF3CQ99613 913 aaKnown RBP16.76■□□□□ 0.27
PABPC1-221ENST00000522720 ZNHIT6Q9NWK9 470 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms