RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 KDSRQ06136 332 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 TRIP13Q15645 432 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 DNAJC21Q5F1R6 531 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CPXM2Q8N436 756 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 USP33Q8TEY7 942 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 SORCS1Q8WY21 1168 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 MAGOHBQ96A72 148 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 CHFRQ96EP1 664 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RPL10LQ96L21 214 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 DNAJC17Q9NVM6 304 aaKnown RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-219ENST00000522387 ZNF212Q9UDV6 495 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 VPS28Q9UK41 221 aa12.67□□□□□ -0.38
PABPC1-219ENST00000522387 COL4A3Q01955 1670 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 MYO18AQ92614 2054 aaKnown RBP12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ANHXE9PGG2 379 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 SNAP91O60641 907 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ECI2O75521 394 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 IFNB1P01574 187 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 FAM153BP0C7A2 387 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 RBP3P10745 1247 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ETS1P14921 441 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 HOXC13P31276 330 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 HCAR3P49019 387 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 LMAN2Q12907 356 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 FAM153CQ494X1 144 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 SYCP2LQ5T4T6 812 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 TTC27Q6P3X3 843 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 FAM217AQ8IXS0 508 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 NECAB3Q96P71 396 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-219ENST00000522387 FBRSL1Q9HCM7 1045 aaKnown RBP12.66□□□□□ -0.38
PABPC1-219ENST00000522387 AMACRQ9UHK6 382 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 FAM153AQ9UHL3 310 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ZNF148Q9UQR1 794 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 LAMA1P25391 3075 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 RASA4BC9J798 803 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 RASA4O43374 803 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 NFATC1O95644 943 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 LATS1O95835 1130 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ADH1CP00326 375 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ETFBP38117 255 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 VPS41P49754 854 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 GDF10P55107 478 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 NRG1Q02297 640 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-219ENST00000522387 TTC31Q49AM3 519 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-219ENST00000522387 DARS2Q6PI48 645 aaKnown RBP12.66□□□□□ -0.38
PABPC1-219ENST00000522387 ARHGAP12Q8IWW6 846 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
PABPC1-219ENST00000522387 GFRA2O00451 464 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 OPA1O60313 960 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 TULP3O75386 442 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 RBL1P28749 1068 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 GJA4P35212 333 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 SERPINB6P35237 376 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 CTSOP43234 321 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-219ENST00000522387 GNA12Q03113 381 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 BYSLQ13895 437 aaKnown RBP12.65□□□□□ -0.38
PABPC1-219ENST00000522387 GEN1Q17RS7 908 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 C6orf118Q5T5N4 469 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 CCDC137Q6PK04 289 aaKnown RBP12.65□□□□□ -0.38
PABPC1-219ENST00000522387 GSTA5Q7RTV2 222 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 CCDC117Q8IWD4 279 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-219ENST00000522387 FAM71DQ8N9W8 422 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 GLIS1Q8NBF1 620 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 NAP1L3Q99457 506 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-219ENST00000522387 SH3GL2Q99962 352 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 FEM1AQ9BSK4 669 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 CAPS2Q9BXY5 557 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 CIPCQ9C0C6 399 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 OBP2AQ9NY56 170 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 TICRRQ7Z2Z1 1910 aa12.65□□□□□ -0.38
PABPC1-219ENST00000522387 NYNRINQ9P2P1 1898 aaKnown RBP12.65□□□□□ -0.38
PABPC1-219ENST00000522387 TTC24A2A3L6 582 aaPredicted RBP12.65□□□□□ -0.39
PABPC1-219ENST00000522387 SGK1O00141 431 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 CES2O00748 559 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 MCF2LO15068 1137 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 CHADO15335 359 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 BNIP3LO60238 219 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 MT-CO1P00395 513 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 ZSCAN5DPP0CG00 497 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 TCF3P15923 654 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 PTPN7P35236 360 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 MTA1Q13330 715 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 PAFAH1B3Q15102 231 aaKnown RBP12.65□□□□□ -0.39
PABPC1-219ENST00000522387 EMBQ6PCB8 327 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 TXNDC11Q6PKC3 985 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 RNF135Q8IUD6 432 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 ATPAF2Q8N5M1 289 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.39
PABPC1-219ENST00000522387 CSGALNACT1Q8TDX6 532 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 E2F7Q96AV8 911 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 OTUB2Q96DC9 234 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 LRRC19Q9H756 370 aa12.65□□□□□ -0.39
PABPC1-219ENST00000522387 RNF14Q9UBS8 474 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms