RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ALFQ53S48 1182 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 PLPP4Q5VZY2 271 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 VSTM1Q6UX27 236 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 DTNBP1Q96EV8 351 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNF112Q9UJU3 913 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 GTF2A1LQ9UNN4 478 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 A0A087X1B8 175 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 ATP6V1C1P21283 382 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 RAD23AP54725 363 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 DSG1Q02413 1049 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 TARBP2Q15633 366 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 EEF1DP3Q658K8 133 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 CYP20A1Q6UW02 462 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 MARK2Q7KZI7 788 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 FAM35AQ86V20 835 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 RIN3Q8TB24 985 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 OR8D1Q8WZ84 308 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 USP7Q93009 1102 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 GPR20Q99678 358 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 NAALADL1Q9UQQ1 740 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 A0A087X0B3 334 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 CCDC189A1A4V9 331 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 XPO1O14980 1071 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 RGS14O43566 566 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 NQO1P15559 274 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 KELP23276 732 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 HPCAL1P37235 193 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 DLG4P78352 724 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 IRF8Q02556 426 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 CEP68Q76N32 757 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 RBM23Q86U06 439 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 MAPRE3Q9UPY8 281 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 ATP4AP20648 1035 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 BGNP21810 368 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 CD86P42081 329 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 BRMS1LQ5PSV4 323 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 DNAAF5Q86Y56 855 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 NOD2Q9HC29 1040 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 COPG1Q9Y678 874 aaKnown RBP16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 TNFSF9P41273 254 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 TTPAP49638 278 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 PFKPQ01813 784 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 HSPA14Q0VDF9 509 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 DGKZQ13574 1117 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 RCN1Q15293 331 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 ADRM1Q16186 407 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 LYPLAL1Q5VWZ2 237 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 CLYBLQ8N0X4 340 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 CYP4Z2PQ8N1L4 340 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 TMEM120AQ9BXJ8 343 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 HAO1Q9UJM8 370 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 ADAM28Q9UKQ2 775 aa16.49■□□□□ 0.23
PCDHA3-201ENST00000522353 B4GALT5O43286 388 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 DNTTP04053 509 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 CCNB1P14635 433 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 CCT8P50990 548 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 CORO7P57737 925 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ETNPPLQ8TBG4 499 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 STAG3L4Q8TBR4 150 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 PIK3R5Q8WYR1 880 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 UNKQ9C0B0 810 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 COMMD8Q9NX08 183 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 PDP2Q9P2J9 529 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNF541Q9H0D2 1346 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 KIF20BQ96Q89 1820 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 NT5C1B-RDH14C9J2C7 533 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 NUDT14O95848 222 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 FTH1P02794 183 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 JAK1P23458 1154 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 CASP5P51878 434 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 NUP107P57740 925 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 RASA2Q15283 850 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 PRMT9Q6P2P2 845 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 FAM71AQ8IYT1 594 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 SNRNP25Q9BV90 132 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 DUSP16Q9BY84 665 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 SEMA4AQ9H3S1 761 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 PIH1D1Q9NWS0 290 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 CA12O43570 354 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 HS6ST1O60243 411 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 USP12O75317 370 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 USP2O75604 605 aaPredicted RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 GLI1P08151 1106 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 KPNB1Q14974 876 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 TCEA2Q15560 299 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 GSTA3Q16772 222 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 PPP1R15BQ5SWA1 713 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 DPP10Q8N608 796 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 KAT5Q92993 513 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 OSBPL6Q9BZF3 934 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 TMCO1Q9UM00 188 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 BAZ2BQ9UIF8 2168 aaKnown RBP16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 SEPT4O43236 478 aa16.48■□□□□ 0.23
PCDHA3-201ENST00000522353 GJB6O95452 261 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms