RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-233	ENST00000522052	CORO1C	Q9ULV4	474 aa	Predicted RBP	5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PCDHGB4	Q9UN71	923 aa		5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	DTX4	Q9Y2E6	619 aa		5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SPATA31A5	Q5VU36	1347 aa		5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SPATA31A6	Q5VVP1	1343 aa		5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SPATA31A7	Q8IWB4	1347 aa		5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PASK	Q96RG2	1323 aa		5.38	□□□□□ -1.55
CTNNA1-233	ENST00000522052	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CEP104	O60308	925 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	GJB3	O75712	270 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	EIF2S1	P05198	315 aa	Known RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ELFN1	P0C7U0	828 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	HKR1	P10072	659 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CD72	P21854	359 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TYK2	P29597	1187 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ACSL1	P33121	698 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CPOX	P36551	454 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CCT8	P50990	548 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SNX16	P57768	344 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CYP4F2	P78329	520 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	OLR1	P78380	273 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PLP2	Q04941	152 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	LARS2	Q15031	903 aa	Known RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	MED22	Q15528	200 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ZKSCAN2	Q63HK3	967 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TMEM65	Q6PI78	240 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ULK2	Q8IYT8	1036 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CPXM2	Q8N436	756 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	C11orf65	Q8NCR3	313 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CELF1	Q92879	486 aa	Known RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	DVL3	Q92997	716 aa	Predicted RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	INTS12	Q96CB8	462 aa	Known RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	COQ10A	Q96MF6	247 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	MXD3	Q9BW11	206 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	AP1M1	Q9BXS5	423 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SLC32A1	Q9H598	525 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ERVK-5	Q9HDB9	667 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TXNRD2	Q9NNW7	524 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SLC2A4RG	Q9NR83	387 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SMPD4	Q9NXE4	827 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ARL15	Q9NXU5	204 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	LRIT1	Q9P2V4	623 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	HSPB7	Q9UBY9	170 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ZNF70	Q9UC06	446 aa	Predicted RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CDH22	Q9UJ99	828 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	RPS6KA6	Q9UK32	745 aa		5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TTBK1	Q5TCY1	1321 aa	Predicted RBP	5.37	□□□□□ -1.55
CTNNA1-233	ENST00000522052		A0A1W2PRQ8	180 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PABPN1L	A6NDY0	278 aa	Known RBP	5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	STRN	O43815	780 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	EXOC3	O60645	756 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TACC1	O75410	805 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PGM3	O95394	542 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	GALT	P07902	379 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	DRD4	P21917	467 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	FMO4	P31512	558 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PPARG	P37231	505 aa	Predicted RBP	5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PBX3	P40426	434 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CLK3	P49761	638 aa	Known RBP	5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	IFI35	P80217	286 aa	Predicted RBP	5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ABHD18	Q0P651	414 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TUBA3C	Q13748	450 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PTPA	Q15257	358 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CDSN	Q15517	529 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ANXA2R	Q3ZCQ2	193 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	FBXO43	Q4G163	708 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TUBA3E	Q6PEY2	450 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	VSTM1	Q6UX27	236 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	NAPRT	Q6XQN6	538 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	NEK8	Q86SG6	692 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TADA2B	Q86TJ2	420 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	RFX6	Q8HWS3	928 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TAGAP	Q8N103	731 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	FRMD1	Q8N878	549 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CADM4	Q8NFZ8	388 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ACTRT2	Q8TDY3	377 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	LINC00476	Q8WZB0	136 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ARHGEF2	Q92974	986 aa	Known RBP	5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ADAD1	Q96M93	576 aa	Known RBP	5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	MACROD1	Q9BQ69	325 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052		Q9N2J8	555 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	SYBU	Q9NX95	663 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ST3GAL5	Q9UNP4	418 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TSC22D4	Q9Y3Q8	395 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CUX2	O14529	1486 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	CECR2	Q9BXF3	1484 aa		5.36	□□□□□ -1.55
CTNNA1-233	ENST00000522052	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	KRTAP4-8	A0A0G2JLE6	195 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	FAM237B	A0A1B0GVD1	139 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	OR6C68	A6NDL8	312 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	TMEM247	A6NEH6	219 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	MYO1G	B0I1T2	1018 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	BTBD19	C9JJ37	291 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	BCAT2	O15382	392 aa	Predicted RBP	5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ESRRB	O95718	433 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	HLA-DQA2	P01906	255 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	ADRB2	P07550	413 aa		5.35	□□□□□ -1.55
CTNNA1-233	ENST00000522052	RARG	P13631	454 aa		5.35	□□□□□ -1.55

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