RNA–Protein interactions for RNA: ENST00000521343.1

TPM3P3-201, Transcript of tropomyosin 3 pseudogene 3, humanhuman

BASIC

Gene TPM3P3, Length 354 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P3-201ENST00000521343 EPHB2P29323 1055 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 OAS2P29728 719 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CA8P35219 290 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 KPNA1P52294 538 aaPredicted RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 EIF3BP55884 814 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 COG7P83436 770 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CREMQ03060 361 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 GBE1Q04446 702 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PCDH1Q08174 1060 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 EFEMP1Q12805 493 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 SLC10A2Q12908 348 aaPredicted RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 MORF4L2Q15014 288 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PAFAH1B3Q15102 231 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 SLC45A4Q5BKX6 768 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 RASIP1Q5U651 963 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 DENND2CQ68D51 928 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 HIBCHQ6NVY1 386 aaPredicted RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 RWDD4Q6NW29 188 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 MSANTD2Q6P1R3 559 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 RHBDF2Q6PJF5 856 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 LRRC31Q6UY01 552 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 B4GALNT4Q76KP1 1039 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CROCCP2Q86T23 111 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 TADA2BQ86TJ2 420 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 GPR65Q8IYL9 337 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 RNF168Q8IYW5 571 aaPredicted RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 ATP6V0D2Q8N8Y2 350 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 GLIS1Q8NBF1 620 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CCNYQ8ND76 341 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PDZD8Q8NEN9 1154 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PHOSPHO2Q8TCD6 241 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 TFB1MQ8WVM0 346 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CASP10Q92851 521 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PKNOX2Q96KN3 472 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 ZNF512Q96ME7 567 aaPredicted RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 ZIM3Q96PE6 472 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CDK5RAP1Q96SZ6 601 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 RAD9AQ99638 391 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CLSTN3Q9BQT9 956 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CCDC77Q9BR77 488 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 VN1R3Q9BXE9 311 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 NACA2Q9H009 215 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 ADAM19Q9H013 955 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 BRD8Q9H0E9 1235 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 MTIF3Q9H2K0 278 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 CYP4F11Q9HBI6 524 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 USP29Q9HBJ7 922 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 ARHGEF4Q9NR80 690 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 ARHGEF38Q9NXL2 777 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 MARCH2Q9P0N8 246 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PAK5Q9P286 719 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 HSFX1Q9UBD0 423 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 NUDT5Q9UKK9 219 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 PLAAQ9Y263 795 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 TLR6Q9Y2C9 796 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 SNX10Q9Y5X0 201 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 RAD54BQ9Y620 910 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
TPM3P3-201ENST00000521343 FAM92AA1XBS5 289 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 WDR27A2RRH5 827 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 C5orf60A6NFR6 353 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 KCNU1A8MYU2 1149 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 FAM72CH0Y354 149 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 AGPSO00116 658 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 DCLK1O15075 740 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 MTSS1O43312 755 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 MSI1O43347 362 aaKnown RBP6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 LPXNO60711 386 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 PAGE1O75459 146 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 GCATO75600 419 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 FGF18O76093 207 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 LRIG2O94898 1065 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 ABLIM3O94929 683 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 GJB5O95377 273 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 SEC24AO95486 1093 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 VNN2O95498 520 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 TBX18O95935 607 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 MOCS2O96007 188 aaPredicted RBP6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 IGLV3-25P01717 112 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 MYZAPP0CAP1 466 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 ITPKAP23677 461 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 HTR7P34969 479 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 ATP5C1P36542 298 aaKnown RBP6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 MAGEA4P43358 317 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 PGFP49763 221 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 TUBP50607 506 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 EPHB3P54753 998 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 ARL4CP56559 192 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 BASP1P80723 227 aaKnown RBP6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 HTRA4P83105 476 aaPredicted RBP6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 AP1B1Q10567 949 aa6.28□□□□□ -1.4
TPM3P3-201ENST00000521343 MTA1Q13330 715 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms