RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SCAIQ8N9R8 606 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 C16orf52Q8NHV5 167 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 HIPK3Q9H422 1215 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 MROH8Q9H579 483 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 ALKBH4Q9NXW9 302 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 MSRB1Q9NZV6 116 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 IFT80Q9P2H3 777 aaPredicted RBP5.59□□□□□ -1.51
SKP1-208ENST00000521216 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.59□□□□□ -1.51
SKP1-208ENST00000521216 TTBK1Q5TCY1 1321 aaPredicted RBP5.58□□□□□ -1.52
SKP1-208ENST00000521216 TMEM247A6NEH6 219 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 HBP1O60381 514 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 TOP3BO95985 862 aaKnown RBP5.58□□□□□ -1.52
SKP1-208ENST00000521216 AGR2O95994 175 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 CHRNB1P11230 501 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 PRF1P14222 555 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 XBP1P17861 261 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 HNF1BP35680 557 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 PGM1P36871 562 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 PLCD1P51178 756 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 ZNF81P51508 661 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 NAA25Q14CX7 972 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 PLK5Q496M5 336 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 ENTPD8Q5MY95 495 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 TMEM268Q5VZI3 342 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 ZKSCAN2Q63HK3 967 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 GHDCQ8N2G8 530 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 CMASQ8NFW8 434 aaPredicted RBP5.58□□□□□ -1.52
SKP1-208ENST00000521216 CENPIQ92674 756 aaPredicted RBP5.58□□□□□ -1.52
SKP1-208ENST00000521216 COQ8BQ96D53 544 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 HVCN1Q96D96 273 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 CLMNQ96JQ2 1002 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 NPLQ9BXD5 320 aaPredicted RBP5.58□□□□□ -1.52
SKP1-208ENST00000521216 GPR63Q9BZJ6 419 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 IL21RQ9HBE5 538 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 HEY2Q9UBP5 337 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 CD207Q9UJ71 328 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
SKP1-208ENST00000521216 SH2D7A6NKC9 451 aaPredicted RBP5.57□□□□□ -1.52
SKP1-208ENST00000521216 ZC3H11AO75152 810 aaKnown RBP eCLIP5.57□□□□□ -1.52
SKP1-208ENST00000521216 LCKP06239 509 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 PTPN9P43378 593 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 MTNR1AP48039 350 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 TLE2Q04725 743 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 TBL3Q12788 808 aaKnown RBP5.57□□□□□ -1.52
SKP1-208ENST00000521216 NFIL3Q16649 462 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 WDR45BQ5MNZ6 344 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 AADACL2Q6P093 401 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 AAGABQ6PD74 315 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 BBS12Q6ZW61 710 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 DPP10Q8N608 796 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 ESX1Q8N693 406 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 PIGOQ8TEQ8 1089 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 CD180Q99467 661 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 TRMOQ9BU70 441 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 TTC12Q9H892 705 aaPredicted RBP5.57□□□□□ -1.52
SKP1-208ENST00000521216 ACTR5Q9H9F9 607 aaPredicted RBP5.57□□□□□ -1.52
SKP1-208ENST00000521216 TMEM160Q9NX00 188 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 ELOVL5Q9NYP7 299 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 ZNF70Q9UC06 446 aaPredicted RBP5.57□□□□□ -1.52
SKP1-208ENST00000521216 CDH22Q9UJ99 828 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 HSF4Q9ULV5 492 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 ICKQ9UPZ9 632 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 CRYL1Q9Y2S2 319 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 AFG3L2Q9Y4W6 797 aa5.57□□□□□ -1.52
SKP1-208ENST00000521216 TARSL2A2RTX5 802 aaKnown RBP5.56□□□□□ -1.52
SKP1-208ENST00000521216 A6NNC1 897 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 PPEF2O14830 753 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 IFIT1P09914 478 aaKnown RBP5.56□□□□□ -1.52
SKP1-208ENST00000521216 CDK4P11802 303 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 SLC16A2P36021 539 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 ME1P48163 572 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 TMPRSS3P57727 454 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.56□□□□□ -1.52
SKP1-208ENST00000521216 MAPK7Q13164 816 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 ALFQ53S48 1182 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 PIK3CD-AS1Q5SR53 167 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 MANEAQ5SRI9 462 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 VWA5B1Q5TIE3 1220 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 MRPL10Q7Z7H8 261 aaKnown RBP5.56□□□□□ -1.52
SKP1-208ENST00000521216 ZNF548Q8NEK5 533 aaPredicted RBP5.56□□□□□ -1.52
SKP1-208ENST00000521216 FAR1Q8WVX9 515 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 ZFYVE19Q96K21 471 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 ZNF778Q96MU6 729 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 WDR83Q9BRX9 315 aaKnown RBP5.56□□□□□ -1.52
SKP1-208ENST00000521216 TAOK3Q9H2K8 898 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 FOXP1Q9H334 677 aaPredicted RBP5.56□□□□□ -1.52
SKP1-208ENST00000521216 SPAG4Q9NPE6 437 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 RNF7Q9UBF6 113 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 RAP2CQ9Y3L5 183 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 HS3ST3B1Q9Y662 390 aa5.56□□□□□ -1.52
SKP1-208ENST00000521216 OR6C68A6NDL8 312 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 C17orf100A8MU93 164 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 ZNF814B7Z6K7 855 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 HOXC11O43248 304 aaPredicted RBP5.55□□□□□ -1.52
SKP1-208ENST00000521216 CNOT3O75175 753 aaKnown RBP5.55□□□□□ -1.52
SKP1-208ENST00000521216 NDUFB8O95169 186 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 IL1AP01583 271 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 HNRNPA1P09651 372 aaKnown RBP eCLIP5.55□□□□□ -1.52
SKP1-208ENST00000521216 GJC1P36383 396 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 INPP5JQ15735 1006 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms