RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 AKR1A1P14550 325 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 CDH2P19022 906 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 WT1P19544 449 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 TM4SF1P30408 202 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 IDUAP35475 653 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 RARRES1P49788 294 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 BLKP51451 505 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 SIM1P81133 766 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 RHAGQ02094 409 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 NEXNQ0ZGT2 675 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ACVR2BQ13705 512 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 PFKFB3Q16875 520 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 SLC9B1Q4ZJI4 515 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 UBAP2Q5T6F2 1119 aaKnown RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF280DQ6N043 979 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 RANBP10Q6VN20 620 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 RNF144BQ7Z419 303 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 KLBQ86Z14 1044 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 CPXM2Q8N436 756 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 PLD5Q8N7P1 536 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 SCAIQ8N9R8 606 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 SH3RF3Q8TEJ3 882 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZFPM2Q8WW38 1151 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 HSPH1Q92598 858 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 REPS1Q96D71 796 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF764Q96H86 408 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF347Q96SE7 839 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 LBHD1Q9BQE6 289 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 TOR3AQ9H497 397 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 Q9N2J8 555 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ANKEF1Q9NU02 776 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 ARL8BQ9NVJ2 186 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 HCFC1R1Q9NWW0 138 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 FBXO40Q9UH90 709 aa5.71□□□□□ -1.5
HMGB1P46-201ENST00000520062 OR6C68A6NDL8 312 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 POC1B-GALNT4F8VUJ3 575 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 UBE2Q2LH0YL09 131 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 AHCYL1O43865 530 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 TSPAN9O75954 239 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 HNRNPCP07910 306 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 SPARCP09486 303 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 CPOXP36551 454 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 CTCFP49711 727 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 KPNB1Q14974 876 aaKnown RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 ZNF667Q5HYK9 610 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 CC2D1BQ5T0F9 858 aaKnown RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 DHRS13Q6UX07 377 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 SERPINA13PQ6UXR4 307 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 RHPN2Q8IUC4 686 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 VRK3Q8IV63 474 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 UEVLDQ8IX04 471 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 C16orf71Q8IYS4 520 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 LSMEM1Q8N8F7 131 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 FAM47BQ8NA70 645 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 CAGE1Q8TC20 777 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 NEK9Q8TD19 979 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 ADAD1Q96M93 576 aaKnown RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 FRG2BQ96QU4 278 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 PIP5K1AQ99755 562 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 SEPT11Q9NVA2 429 aaKnown RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 SLC17A6Q9P2U8 582 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 PEMTQ9UBM1 199 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 LIMA1Q9UHB6 759 aaKnown RBP5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 CDH22Q9UJ99 828 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 DHDHQ9UQ10 334 aa5.7□□□□□ -1.5
HMGB1P46-201ENST00000520062 LIPT2A6NK58 231 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 LDLRAD4O15165 306 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 NARSO43776 548 aaKnown RBP5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 CEP104O60308 925 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 CYP2D6P10635 497 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 FMO4P31512 558 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 ICAM3P32942 547 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 PSMB10P40306 273 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 SKIV2L2P42285 1042 aaKnown RBP5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 SOX2P48431 317 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 CLK3P49761 638 aaKnown RBP5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 CREB5Q02930 508 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 WTAPQ15007 396 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 RPE65Q16518 533 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 PLK5Q496M5 336 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 RILPL1Q5EBL4 403 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 C10orf76Q5T2E6 689 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 HECTD2Q5U5R9 776 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 CDC73Q6P1J9 531 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 FAM149B1Q96BN6 582 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 UROC1Q96N76 676 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 ENTPD7Q9NQZ7 604 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 EHD2Q9NZN4 543 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 SLCO3A1Q9UIG8 710 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 KCNE2Q9Y6J6 123 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 RUSC2Q8N2Y8 1516 aa5.69□□□□□ -1.5
HMGB1P46-201ENST00000520062 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 AGAP14A8MT82 685 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 B4DLN1 442 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 PLOD3O60568 738 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 USP12O75317 370 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 ADAP00813 363 aa5.68□□□□□ -1.5
HMGB1P46-201ENST00000520062 SERPINC1P01008 464 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms