RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 RPRD1AQ96P16 312 aaPredicted RBP12.12□□□□□ -0.47
POLB-208ENST00000520008 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 ANLNQ9NQW6 1124 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 SLC12A6Q9UHW9 1150 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 RWDD2AQ9UIY3 292 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 AJAP1Q9UKB5 411 aaPredicted RBP12.12□□□□□ -0.47
POLB-208ENST00000520008 VANGL2Q9ULK5 521 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
POLB-208ENST00000520008 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
POLB-208ENST00000520008 MYLKQ15746 1914 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 SYNJ2BP-COX16A0A087WUM0 186 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PAGE1O75459 146 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 CLDN11O75508 207 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 GRAP2O75791 330 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 CTSLP07711 333 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 SRCP12931 536 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PON1P27169 355 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 GGCXP38435 758 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 DLG2Q15700 870 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 ARHGAP44Q17R89 818 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 CCDC157Q569K6 752 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 SLC45A4Q5BKX6 768 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PIP5KL1Q5T9C9 394 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 FAM46CQ5VWP2 391 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 DPY19L2P1Q6NXN4 242 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 C11orf57Q6ZUT1 292 aaPredicted RBP12.11□□□□□ -0.47
POLB-208ENST00000520008 Q6ZVU0 165 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 DSG4Q86SJ6 1040 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 C14orf80Q86SX3 495 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PASD1Q8IV76 773 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 ZNF683Q8IZ20 524 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 RFFLQ8WZ73 363 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 NT5C3BQ969T7 300 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 NXPE2Q96DL1 559 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PSMB7Q99436 277 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 NPY6RQ99463 290 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 ARHGEF38Q9NXL2 777 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 SLC25A13Q9UJS0 675 aa12.11□□□□□ -0.47
POLB-208ENST00000520008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 C1QTNF3-AMACRE9PGA6 284 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 CNTN5O94779 1100 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 FGFR1OPO95684 399 aaKnown RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 MAT2AP31153 395 aaKnown RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 NOS2P35228 1153 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 CLCN1P35523 988 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 HNF1BP35680 557 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 CDH4P55283 916 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 SLC6A3Q01959 620 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 ZNF177Q13360 481 aaPredicted RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 ILKQ13418 452 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 BECN1Q14457 450 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 RTP5Q14D33 572 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 EXOC3L4Q17RC7 722 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 PROX2Q3B8N5 592 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 SETMARQ53H47 684 aaPredicted RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 ALFQ53S48 1182 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 HES3Q5TGS1 186 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 GBP6Q6ZN66 633 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 CACTIN-AS1Q8N1I8 211 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 PGAP3Q96FM1 320 aaPredicted RBP12.1□□□□□ -0.47
POLB-208ENST00000520008 LRIG1Q96JA1 1093 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 PPP1R9BQ96SB3 815 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 PREBQ9HCU5 417 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 VPS28Q9UK41 221 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 DOCK4Q8N1I0 1966 aa12.1□□□□□ -0.47
POLB-208ENST00000520008 IGLV3-10A0A075B6K4 115 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 PRAMEF26H0Y7S4 382 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 M0QYT0 321 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 RNF103O00237 685 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 TLX3O43711 291 aaPredicted RBP12.09□□□□□ -0.47
POLB-208ENST00000520008 MAGEC1O60732 1142 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 RNGTTO60942 597 aaKnown RBP12.09□□□□□ -0.47
POLB-208ENST00000520008 ADCY5O95622 1261 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 MT-CO1P00395 513 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 CKMT2P17540 419 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 TFE3P19532 575 aaPredicted RBP12.09□□□□□ -0.47
POLB-208ENST00000520008 ACP1P24666 158 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 CDH5P33151 784 aaPredicted RBP12.09□□□□□ -0.47
POLB-208ENST00000520008 USP8P40818 1118 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 CXCR3P49682 368 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 PTK2Q05397 1052 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 TARDBPQ13148 414 aaKnown RBP eCLIP12.09□□□□□ -0.47
POLB-208ENST00000520008 NME3Q13232 169 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 POM121L1PQ3SYA9 428 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 ACCSLQ4AC99 568 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 BRMS1LQ5PSV4 323 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 OR6B2Q6IFH4 312 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 BNIPLQ7Z465 357 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 SLC47A2Q86VL8 602 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 ZDHHC17Q8IUH5 632 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 RNF34Q969K3 372 aa12.09□□□□□ -0.47
POLB-208ENST00000520008 NOX5Q96PH1 765 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms