RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TAS2R38P59533 333 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CYP27A1Q02318 531 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PTK2BQ14289 1009 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 SV2CQ496J9 727 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 C14orf28Q4W4Y0 310 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 EFHC2Q5JST6 749 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CHST9Q7L1S5 443 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PRPF39Q86UA1 669 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 SFTPA2Q8IWL1 248 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PHC2Q8IXK0 858 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 LMX1AQ8TE12 382 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 BMFQ96LC9 184 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 TMEM74Q96NL1 305 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC26A6Q9BXS9 759 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 B3GNT4Q9C0J1 378 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CLPBQ9H078 707 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 LRRN3Q9H3W5 708 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 MLXIPLQ9NP71 852 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 KMT5AQ9NQR1 393 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CROTQ9UKG9 612 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PILRAQ9UKJ1 303 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PCDHA12Q9UN75 941 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 KCNJ14Q9UNX9 436 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 DMTF1Q9Y222 760 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 NTNG1Q9Y2I2 539 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 PCDHGA3Q9Y5H0 932 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 CSNK1G3Q9Y6M4 447 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 RNF215Q9Y6U7 377 aa7.04□□□□□ -1.28
CTNNA1-216ENST00000519489 TTC34A8MYJ7 566 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 TISP43B9A030 160 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 C19orf84I3L1E1 186 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 SGSM2O43147 1006 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 OIP5O43482 229 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 DTNBO60941 627 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 RFPL1O75677 317 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 F9P00740 461 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 DLDP09622 509 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 GCFC2P16383 781 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 PLCG1P19174 1290 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 CAPN3P20807 821 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 CHMLP26374 656 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 ANXA13P27216 316 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 HOXD9P28356 352 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 POLR2BP30876 1174 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 HNRNPKP61978 463 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 EIF2B5Q13144 721 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 HNRNPA1L2Q32P51 320 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 MDH1BQ5I0G3 518 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 MBLAC2Q68D91 279 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 TMEM214Q6NUQ4 689 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 C4orf50Q6ZRC1 276 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 Q6ZSR6 202 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 SND1Q7KZF4 910 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 TRIM69Q86WT6 500 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 AHI1Q8N157 1196 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 NUP93Q8N1F7 819 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 RBMXL3Q8N7X1 1067 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 KYQ8NBH2 561 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 OVCA2Q8WZ82 227 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 NDRG1Q92597 394 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 NAT6Q93015 286 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 IFT43Q96FT9 208 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 LMLNQ96KR4 655 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 NTPCRQ9BSD7 190 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 RUSC1Q9BVN2 902 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 B3GNT5Q9BYG0 378 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 SLC29A3Q9BZD2 475 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 TMEM60Q9H2L4 133 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 BHMT2Q9H2M3 363 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 GPN2Q9H9Y4 310 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 NMUR1Q9HB89 426 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 ABCB8Q9NUT2 735 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 COPG2Q9UBF2 871 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 SARDHQ9UL12 918 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 SCML1Q9UN30 329 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 DERAQ9Y315 318 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 KCTD3Q9Y597 815 aa7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 OAS3Q9Y6K5 1087 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-216ENST00000519489 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ABCA4P78363 2273 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 A0A0B4J269 797 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 POM121BA6NF01 834 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 ZSCAN5CA6NGD5 496 aaPredicted RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TMX2-CTNND1H3BSU7 103 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TPP1O14773 563 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 OGTO15294 1046 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 YY2O15391 372 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 PLRG1O43660 514 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 COX6B1P14854 86 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 GSPT1P15170 499 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 TCN2P20062 427 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 CD70P32970 193 aa7.02□□□□□ -1.29
CTNNA1-216ENST00000519489 CSTF2P33240 577 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms