RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
TRAPPC9-206ENST00000519482 ANKRD6Q9Y2G4 727 aa12.82□□□□□ -0.36
TRAPPC9-206ENST00000519482 DAAM1Q9Y4D1 1078 aa12.82□□□□□ -0.36
TRAPPC9-206ENST00000519482 SLCO1B1Q9Y6L6 691 aa12.82□□□□□ -0.36
TRAPPC9-206ENST00000519482 SYNJ2BP-COX16A0A087WUM0 186 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 A0A1W2PPC4 97 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 RIOK3O14730 519 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 MID1O15344 667 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 CTIFO43310 598 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 GRAP2O75791 330 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 RNASEH2AO75792 299 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 IPO7O95373 1038 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 ADH1BP00325 375 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 ERBB2P04626 1255 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 IGHV4-34P06331 123 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 FTH1P19P0C7X4 201 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 C5AR1P21730 350 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 SLC8A1P32418 973 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 GALCP54803 685 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 RACK1P63244 317 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 TUBB4BP68371 445 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 ELAVL3Q14576 367 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 KIF19Q2TAC6 998 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 PTPN20Q4JDL3 420 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 DPY19L2P1Q6NXN4 242 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 SND1Q7KZF4 910 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 MMAAQ8IVH4 418 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 CHCHD4Q8N4Q1 142 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 NEK11Q8NG66 645 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 OR2T34Q8NGX1 318 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 BAHD1Q8TBE0 780 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 IGSF8Q969P0 613 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 RPL10LQ96L21 214 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 RPRD1AQ96P16 312 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 ORAI3Q9BRQ5 295 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 NEUROG2Q9H2A3 272 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 SYNCQ9H7C4 482 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 COX16Q9P0S2 106 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 ZMIZ1Q9ULJ6 1067 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 FNDC3AQ9Y2H6 1198 aaKnown RBP12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
TRAPPC9-206ENST00000519482 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 A0A1W2PP55 124 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SOWAHDA6NJG2 315 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 EIF3CLB5ME19 914 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 C10orf142B7Z368 130 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 M0QYT0 321 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 KIF5CO60282 957 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 DFNA5O60443 496 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CLDN11O75508 207 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 GOT1P17174 413 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 MZF1P28698 734 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CASQ1P31415 396 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CDH5P33151 784 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SCNN1AP37088 669 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CTSKP43235 329 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 GABRB2P47870 512 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 STK19P49842 368 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CCR5P51681 352 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 NME3Q13232 169 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 AUHQ13825 339 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 C5orf22Q49AR2 442 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 NCEH1Q6PIU2 408 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SYT10Q6XYQ8 523 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 ADAT2Q7Z6V5 191 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 TMEM35BQ8NCS4 154 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SKA1Q96BD8 255 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SPAG5Q96R06 1193 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 NPY6RQ99463 290 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 CDC6Q99741 560 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 HAUS4Q9H6D7 363 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 L2HGDHQ9H9P8 463 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 PLCB1Q9NQ66 1216 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SERGEFQ9UGK8 458 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 SLC25A13Q9UJS0 675 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 VANGL2Q9ULK5 521 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 STAP1Q9ULZ2 295 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 MYO6Q9UM54 1294 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 HS3ST4Q9Y661 456 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 ZFHX4Q86UP3 3567 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 WDFY3Q8IZQ1 3526 aa12.8□□□□□ -0.36
TRAPPC9-206ENST00000519482 COL5A1P20908 1838 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 FAM47DPA6NHR8 397 aa12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 VILLO15195 856 aa12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 PAGE1O75459 146 aa12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 NDUFA10O95299 355 aa12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 F9P00740 461 aa12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC9-206ENST00000519482 PSMD8P48556 350 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms