RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 KDM1BQ8NB78 822 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 NETO2Q8NC67 525 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 SPON2Q9BUD6 331 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 KLC2Q9H0B6 622 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 THAP2Q9H0W7 228 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 PABPC3Q9H361 631 aaKnown RBP13.64□□□□□ -0.23
VEGFA-219ENST00000518824 NOL6Q9H6R4 1146 aaKnown RBP13.64□□□□□ -0.23
VEGFA-219ENST00000518824 PARVAQ9NVD7 372 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 PCSK1NQ9UHG2 260 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
VEGFA-219ENST00000518824 A0A1W2PP55 124 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 ILVBLA1L0T0 632 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 CREB3O43889 395 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 BNIP3LO60238 219 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 ZNF821O75541 412 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-219ENST00000518824 DNTTP04053 509 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 CTSLP07711 333 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 RHOQP17081 205 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 SLC8A1P32418 973 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 EIF4A3P38919 411 aaKnown RBP13.63□□□□□ -0.23
VEGFA-219ENST00000518824 OXCT1P55809 520 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 GNA12Q03113 381 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 SULT2A1Q06520 285 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 TRIM61Q5EBN2 209 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 SPDYCQ5MJ68 293 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 DCAF12L1Q5VU92 463 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 PEAR1Q5VY43 1037 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-219ENST00000518824 GAS2L3Q86XJ1 694 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 DCAF4L2Q8NA75 395 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 CHST14Q8NCH0 376 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 OR2I1PQ8NGU4 316 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 TBC1D31Q96DN5 1066 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 CHP1Q99653 195 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 PACSIN1Q9BY11 444 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 NEUROG2Q9H2A3 272 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 TNKS2Q9H2K2 1166 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 TMEM248Q9NWD8 314 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 FBXL12Q9NXK8 326 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 SLC25A13Q9UJS0 675 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 HS3ST2Q9Y278 367 aa13.63□□□□□ -0.23
VEGFA-219ENST00000518824 PLXNA2O75051 1894 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 METTL12A8MUP2 240 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 PRR5-ARHGAP8B1AHC4 643 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 CBX4O00257 560 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 CDX4O14627 284 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 IL1R2P27930 398 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 MIPP30301 263 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 L1CAMP32004 1257 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 DRD3P35462 400 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ADKP55263 362 aaKnown RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ARHGAP8P85298 464 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 GFPT1Q06210 699 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 CCDC122Q5T0U0 273 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 C6orf118Q5T5N4 469 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 STPG1Q5TH74 334 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 SPECC1LQ69YQ0 1117 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 TXNRD3NBQ6F5E7 133 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 RGL4Q8IZJ4 473 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ATP11CQ8NB49 1132 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ARHGEF2Q92974 986 aaKnown RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 KCTD15Q96SI1 283 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 SNRNP25Q9BV90 132 aaKnown RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 EDEM2Q9BV94 578 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ACE2Q9BYF1 805 aaPredicted RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 FBRSQ9HAH7 460 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ATP13A1Q9HD20 1204 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 EIF2B4Q9UI10 523 aaKnown RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 CDV3Q9UKY7 258 aaKnown RBP13.62□□□□□ -0.23
VEGFA-219ENST00000518824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.235e-11■□□□□ 9.1
VEGFA-219ENST00000518824 LAMA1P25391 3075 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 DOCK9Q9BZ29 2069 aa13.62□□□□□ -0.23
VEGFA-219ENST00000518824 ANKRD62A6NC57 917 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 C4orf47A7E2U8 309 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 SLC30A4O14863 429 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 KHNYNO15037 678 aaKnown RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 LRCH4O75427 683 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 SEMA4FO95754 770 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 IL1BP01584 269 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 CFIP05156 583 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 EPHB2P29323 1055 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 OXTRP30559 389 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 NNMTP40261 264 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 GALCP54803 685 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 KRT83P78385 493 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 ASTE1Q2TB18 679 aaPredicted RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 EFHC2Q5JST6 749 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 PPP1R2P3Q6NXS1 205 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 ALKBH5Q6P6C2 394 aaKnown RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 HDDC3Q8N4P3 179 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 ZCCHC9Q8N567 271 aaKnown RBP13.61□□□□□ -0.23
VEGFA-219ENST00000518824 OR2A12Q8NGT7 310 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 C1orf216Q8TAB5 229 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 NETO1Q8TDF5 533 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 GANCQ8TET4 914 aa13.61□□□□□ -0.23
VEGFA-219ENST00000518824 DNASE2BQ8WZ79 361 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms