RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 SIN3BO75182 1162 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 ZMPSTE24O75844 475 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 IPO7O95373 1038 aaKnown RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 GOT1P17174 413 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 GLDCP23378 1020 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 ACVRL1P37023 503 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 SSR1P43307 286 aaKnown RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 YBEYP58557 167 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 POLD3Q15054 466 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 RETSATQ6NUM9 610 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 UMODL1-AS1Q8N2C9 162 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 FRS2Q8WU20 508 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 PTPRN2Q92932 1015 aa22.5■■□□□ 1.19
VEGFA-217ENST00000518538 ZC3H10Q96K80 434 aaKnown RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 NOL6Q9H6R4 1146 aaKnown RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 CWC15Q9P013 229 aaKnown RBP22.5■■□□□ 1.19
VEGFA-217ENST00000518538 H3BRJ5 948 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 DAPK3O43293 454 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 MT-CO1P00395 513 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 SRCP12931 536 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 MRE11P49959 708 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 CLCN6P51797 869 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 SLC20A2Q08357 652 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 MESDQ14696 234 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 DLG2Q15700 870 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 LPAL2Q16609 132 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 ACCSLQ4AC99 568 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 LAIR1Q6GTX8 287 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 RAD9BQ6WBX8 426 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 KBTBD6Q86V97 674 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 CPNE8Q86YQ8 564 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 TMEM139Q8IV31 216 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 ATP11CQ8NB49 1132 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 RSPH9Q9H1X1 276 aaPredicted RBP22.49■■□□□ 1.19
VEGFA-217ENST00000518538 USP36Q9P275 1121 aaKnown RBP22.49■■□□□ 1.19
VEGFA-217ENST00000518538 HPCAL4Q9UM19 191 aa22.49■■□□□ 1.19
VEGFA-217ENST00000518538 TMEM110-MUSTN1A8MSY1 372 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 GFRA3O60609 400 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ACADMP11310 421 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 VAV1P15498 845 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ERCC2P18074 760 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 BCKDHBP21953 392 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ARL4AP40617 200 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 HADHBP55084 474 aaKnown RBP22.48■■□□□ 1.19
VEGFA-217ENST00000518538 GSDMDP57764 484 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ARF5P84085 180 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ZBTB16Q05516 673 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 DPYSQ14117 519 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ELAVL3Q14576 367 aaKnown RBP22.48■■□□□ 1.19
VEGFA-217ENST00000518538 PARP15Q460N3 678 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 PLK5Q496M5 336 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ZNF776Q68DI1 518 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-217ENST00000518538 LINGO4Q6UY18 593 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 POLNQ7Z5Q5 900 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 FAM160A2Q8N612 972 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-217ENST00000518538 PCDH18Q9HCL0 1135 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 ITM2CQ9NQX7 267 aa22.48■■□□□ 1.19
VEGFA-217ENST00000518538 IGHV1OR15-9A0A0B4J2B8 117 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 RASA4BC9J798 803 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 K7ERQ8 282 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 RASA4O43374 803 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 RNASEH1O60930 286 aaKnown RBP22.47■■□□□ 1.19
VEGFA-217ENST00000518538 SERPINH1P50454 418 aaKnown RBP22.47■■□□□ 1.19
VEGFA-217ENST00000518538 NDST2P52849 883 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 GEMIN4P57678 1058 aaKnown RBP22.47■■□□□ 1.19
VEGFA-217ENST00000518538 TAS2R40P59535 323 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 RPS14P62263 151 aaKnown RBP22.47■■□□□ 1.19
VEGFA-217ENST00000518538 ELF2Q15723 593 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 CACUL1Q86Y37 369 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 STK40Q8N2I9 435 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 FRMD1Q8N878 549 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 DUSP15Q9H1R2 295 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-217ENST00000518538 CD93Q9NPY3 652 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 MBD1Q9UIS9 605 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-217ENST00000518538 CYP8B1Q9UNU6 501 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 PLXND1Q9Y4D7 1925 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 CHD5Q8TDI0 1954 aa22.47■■□□□ 1.19
VEGFA-217ENST00000518538 A0A0A6YYK5 440 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-217ENST00000518538 KDELR3O43731 214 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 RHOBTB1O94844 696 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 IGLV3-19P01714 112 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 KRT7P08729 469 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 GJC1P36383 396 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 TPMTP51580 245 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 KRT81Q14533 505 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 PMS2CLQ68D20 193 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 SLC36A4Q6YBV0 504 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 Q6ZVU0 165 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 FAM71BQ8TC56 605 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 HMCESQ96FZ2 354 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 LOXL4Q96JB6 756 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 CSPG4P5Q96PW8 444 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 FAM129BQ96TA1 746 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 CEP44Q9C0F1 390 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 KLC2Q9H0B6 622 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 LRRC19Q9H756 370 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 GRPEL1Q9HAV7 217 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 RCOR3Q9P2K3 495 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-217ENST00000518538 GMEB2Q9UKD1 530 aa22.46■■□□□ 1.19
VEGFA-217ENST00000518538 SCML1Q9UN30 329 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms