RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 PRPF39Q86UA1 669 aaKnown RBP12.54□□□□□ -0.4
SNHG4-208ENST00000514110 SPATS2Q86XZ4 545 aaKnown RBP12.54□□□□□ -0.4
SNHG4-208ENST00000514110 FAM71AQ8IYT1 594 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 ZNF683Q8IZ20 524 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 SH2D3CQ8N5H7 860 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 EID2Q8N6I1 236 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 MLKLQ8NB16 471 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 PIP4K2CQ8TBX8 421 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 CNDP2Q96KP4 475 aaKnown RBP12.54□□□□□ -0.4
SNHG4-208ENST00000514110 PSMB7Q99436 277 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 NPY6RQ99463 290 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 KDM4CQ9H3R0 1056 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 TMPRSS4Q9NRS4 437 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 TPX2Q9ULW0 747 aaKnown RBP12.54□□□□□ -0.4
SNHG4-208ENST00000514110 SNX10Q9Y5X0 201 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 ANKRD11Q6UB99 2663 aaPredicted RBP12.54□□□□□ -0.4
SNHG4-208ENST00000514110 RNF103O00237 685 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 ALOX15BO15296 676 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SLC7A4O43246 635 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 BNIP3LO60238 219 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SNAP91O60641 907 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 LDOC1O95751 146 aaPredicted RBP12.53□□□□□ -0.4
SNHG4-208ENST00000514110 CTSLP07711 333 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SRCP12931 536 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 ZNF18P17022 549 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 CXCR3P49682 368 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SULT1E1P49888 294 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SNX16P57768 344 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 RNASE9P60153 205 aaKnown RBP12.53□□□□□ -0.4
SNHG4-208ENST00000514110 CYP4F3Q08477 520 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 MTA1Q13330 715 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
SNHG4-208ENST00000514110 TPD52L1Q16890 204 aaPredicted RBP12.53□□□□□ -0.4
SNHG4-208ENST00000514110 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 HSP90AA4PQ58FG1 418 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SLC45A4Q5BKX6 768 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 MIIPQ5JXC2 388 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 FAM46CQ5VWP2 391 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 KANSL1Q7Z3B3 1105 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 TRIM69Q86WT6 500 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 MFSD2AQ8NA29 543 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 TBCBQ99426 244 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 TKTL2Q9H0I9 626 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 MUC3BQ9H195 1237 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 NDST4Q9H3R1 872 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 WDCPQ9H6R7 721 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 ERVMER34-1Q9H9K5 563 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNHG4-208ENST00000514110 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 PCDHGA1Q9Y5H4 931 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 LOC400499M0QZD8 3231 aa12.53□□□□□ -0.4
SNHG4-208ENST00000514110 A0A0D9SEW6 157 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 C1QTNF3-AMACRE9PGA6 284 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 K7ERQ8 282 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 YKT6O15498 198 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 SMAD6O43541 496 aaKnown RBP12.52□□□□□ -0.41
SNHG4-208ENST00000514110 RHOCP08134 193 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 CYP11B1P15538 503 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 RRM1P23921 792 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 CDH5P33151 784 aaPredicted RBP12.52□□□□□ -0.41
SNHG4-208ENST00000514110 GABRB2P47870 512 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 RXRGP48443 463 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 ARRB1P49407 418 aaPredicted RBP12.52□□□□□ -0.41
SNHG4-208ENST00000514110 TAS2R38P59533 333 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 KCNMA1Q12791 1236 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 RAPGEF1Q13905 1077 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 DRAP1Q14919 205 aaPredicted RBP12.52□□□□□ -0.41
SNHG4-208ENST00000514110 VWA3BQ502W6 1294 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 C2CD6Q53TS8 623 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 BRMS1LQ5PSV4 323 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 ARTNQ5T4W7 220 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 PIP5KL1Q5T9C9 394 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 SFMBT2Q5VUG0 894 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 XYLT1Q86Y38 959 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 OR2A12Q8NGT7 310 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 HNRNPLLQ8WVV9 542 aaKnown RBP12.52□□□□□ -0.41
SNHG4-208ENST00000514110 PGAP3Q96FM1 320 aaPredicted RBP12.52□□□□□ -0.41
SNHG4-208ENST00000514110 TUBGCP2Q9BSJ2 902 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 RRN3Q9NYV6 651 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 MPP6Q9NZW5 540 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 VPS51Q9UID3 782 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 DMTF1Q9Y222 760 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 FHOD1Q9Y613 1164 aa12.52□□□□□ -0.41
SNHG4-208ENST00000514110 CACNA1GO43497 2377 aa12.51□□□□□ -0.41
SNHG4-208ENST00000514110 DOCK9Q9BZ29 2069 aa12.51□□□□□ -0.41
SNHG4-208ENST00000514110 DRGXA6NNA5 263 aa12.51□□□□□ -0.41
SNHG4-208ENST00000514110 RFPL3O75679 317 aa12.51□□□□□ -0.41
SNHG4-208ENST00000514110 CHRNA3P32297 505 aa12.51□□□□□ -0.41
SNHG4-208ENST00000514110 NUDT1P36639 197 aa12.51□□□□□ -0.41
SNHG4-208ENST00000514110 ACADVLP49748 655 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms