RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RGS9BPQ6ZS82 235 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 OTOP3Q7RTS5 596 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 TFAP2DQ7Z6R9 452 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 TMCO2Q7Z6W1 182 aaPredicted RBP15.25■□□□□ 0.03
VCAN-211ENST00000513984 LINC00523Q86TU6 105 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 IGSF8Q969P0 613 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 APOPT1Q96IL0 206 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 MYRFLQ96LU7 910 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 UGT1A7Q9HAW7 530 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 UGT1A10Q9HAW8 530 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 UGT1A8Q9HAW9 530 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 IPO11Q9UI26 975 aaKnown RBP15.25■□□□□ 0.03
VCAN-211ENST00000513984 DNMT3LQ9UJW3 386 aa15.25■□□□□ 0.03
VCAN-211ENST00000513984 ANXA9O76027 345 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 PEX11BO96011 259 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 TAC1P20366 129 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 CNTFP26441 200 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 FOXN2P32314 431 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 ATP5C1P36542 298 aaKnown RBP15.24■□□□□ 0.03
VCAN-211ENST00000513984 NEK3P51956 506 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 CDH17Q12864 832 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 PDK4Q16654 411 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 NADSYN1Q6IA69 706 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 FAM117BQ6P1L5 589 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 DDX53Q86TM3 631 aaKnown RBP15.24■□□□□ 0.03
VCAN-211ENST00000513984 TMEM135Q86UB9 458 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 CNPY4Q8N129 248 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 DNAAF3Q8N9W5 541 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 CDKL2Q92772 493 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 KLF6Q99612 283 aaPredicted RBP15.24■□□□□ 0.03
VCAN-211ENST00000513984 IL22Q9GZX6 179 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 SPG21Q9NZD8 308 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 GRID1Q9ULK0 1009 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 YIPF1Q9Y548 306 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 RPS6KL1Q9Y6S9 549 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 ZNF840PA6NDX5 716 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 GOLGA8RI6L899 631 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 USP1O94782 785 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 HLA-DQB2P05538 268 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 CCNFP41002 786 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 RAB33AQ14088 237 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 HNRNPDQ14103 355 aaKnown RBP15.24■□□□□ 0.03
VCAN-211ENST00000513984 C5orf22Q49AR2 442 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 HECTD3Q5T447 861 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 HHATQ5VTY9 493 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 LVRNQ6Q4G3 990 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 SRLQ86TD4 932 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 CHSY1Q86X52 802 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 UNC5BQ8IZJ1 945 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 TCP10LQ8TDR4 215 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 HMCESQ96FZ2 354 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 TRMT2BQ96GJ1 504 aaKnown RBP15.24■□□□□ 0.03
VCAN-211ENST00000513984 ZNF512Q96ME7 567 aaPredicted RBP15.24■□□□□ 0.03
VCAN-211ENST00000513984 FGFR1OP2Q9NVK5 253 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 RBM22Q9NW64 420 aaKnown RBP eCLIP15.24■□□□□ 0.03
VCAN-211ENST00000513984 MKS1Q9NXB0 559 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 UBP1Q9NZI7 540 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 FAM169AQ9Y6X4 670 aa15.24■□□□□ 0.03
VCAN-211ENST00000513984 FAM237BA0A1B0GVD1 139 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 MAGEB16A2A368 324 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 HMX2A2RU54 273 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 LPXNO60711 386 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 BAIAP3O94812 1187 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 OAS1P00973 400 aaKnown RBP15.23■□□□□ 0.03
VCAN-211ENST00000513984 URODP06132 367 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 PYGBP11216 843 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 TACR2P21452 398 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 MAPKAPK2P49137 400 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 KCNQ1P51787 676 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 GEMP55040 296 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 MGAT5Q09328 741 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 YTHDF3Q7Z739 585 aaKnown RBP15.23■□□□□ 0.03
VCAN-211ENST00000513984 SPATA22Q8NHS9 363 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 CERS2Q96G23 380 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 RPRD1AQ96P16 312 aaPredicted RBP15.23■□□□□ 0.03
VCAN-211ENST00000513984 PAIP2Q9BPZ3 127 aaKnown RBP15.23■□□□□ 0.03
VCAN-211ENST00000513984 CYP4F11Q9HBI6 524 aa15.23■□□□□ 0.03
VCAN-211ENST00000513984 SNX3O60493 162 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 RFPL1O75677 317 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ALADP13716 330 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 RAG1P15918 1043 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ALDH1A3P47895 512 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 TNK2Q07912 1038 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 DNAJC3Q13217 504 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ITIH4Q14624 930 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 PARP15Q460N3 678 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 TIFABQ6ZNK6 161 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 CCDC117Q8IWD4 279 aaPredicted RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 GPR65Q8IYL9 337 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 TMEM199Q8N511 208 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
VCAN-211ENST00000513984 CCDC197Q8NCU1 140 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 ZNF669Q96BR6 464 aaPredicted RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 CABS1Q96KC9 395 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 FCRL3Q96P31 734 aaPredicted RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 ELAC2Q9BQ52 826 aaKnown RBP15.22■□□□□ 0.03
VCAN-211ENST00000513984 TBL1YQ9BQ87 522 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 APOL2Q9BQE5 337 aa15.22■□□□□ 0.03
VCAN-211ENST00000513984 RETREG1Q9H6L5 497 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms