RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GPAT2Q6NUI2 795 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 BRSK1Q8TDC3 778 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 ZNF518BQ9C0D4 1074 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 ABHD16BQ9H3Z7 469 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 ALG13Q9NP73 1137 aaKnown RBP9.07□□□□□ -0.96
VCAN-208ENST00000512590 TDP1Q9NUW8 608 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 ANGPT4Q9Y264 503 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 GRIN2AQ12879 1464 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 DGKIO75912 1065 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 CPNE6O95741 557 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 ACTR1AP61163 376 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 MLC1Q15049 377 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 HECTD2Q5U5R9 776 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 LIN54Q6MZP7 749 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 OAFQ86UD1 273 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 HID1Q8IV36 788 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 SMARCD1Q96GM5 515 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 SPATA5L1Q9BVQ7 753 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 TMEM121BQ9BXQ6 578 aaPredicted RBP9.07□□□□□ -0.96
VCAN-208ENST00000512590 DUS2Q9NX74 493 aaKnown RBP9.07□□□□□ -0.96
VCAN-208ENST00000512590 PCDHB10Q9UN67 800 aa9.07□□□□□ -0.96
VCAN-208ENST00000512590 A8MUI8 341 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 SLC33A1O00400 549 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 CXCL11O14625 94 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TSPAN1O60635 241 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 RSL1D1O76021 490 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 FTH1P02794 183 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 FXR2P51116 673 aaKnown RBP eCLIP9.06□□□□□ -0.964e-8■■■■■ 35.7
VCAN-208ENST00000512590 PRKG2Q13237 762 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ZNF211Q13398 564 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 SF1Q15637 639 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 MLIPQ5VWP3 458 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 RNF19BQ6ZMZ0 732 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 PAGE5Q96GU1 130 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 RRAGDQ9NQL2 400 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 PSMD13Q9UNM6 376 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TMEM2Q9UHN6 1383 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 FAM92AA1XBS5 289 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TSPAN19P0C672 248 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 EPORP19235 508 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MUTP22033 750 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 STAT5AP42229 794 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MAPK8P45983 427 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MMP14P50281 582 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 FNBP1LQ5T0N5 605 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ZCCHC12Q6PEW1 402 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 RBM43Q6ZSC3 357 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 RFX8Q6ZV50 586 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 HAVCR1Q96D42 359 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 CCDC126Q96EE4 140 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 C1QTNF1Q9BXJ1 281 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 PIH1D3Q9NQM4 214 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 SH2B2O14492 632 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 LCA5LO95447 670 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ELFN1P0C7U0 828 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 GABRR2P28476 465 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MRPS22P82650 360 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 CHRNB3Q05901 458 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 NR6A1Q15406 480 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ZMYM1Q5SVZ6 1142 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TTC39BQ5VTQ0 682 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 DUPD1Q68J44 220 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 DENND5BQ6ZUT9 1274 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TMC8Q8IU68 726 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 SYT12Q8IV01 421 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 PROM2Q8N271 834 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 PJA1Q8NG27 643 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MTFMTQ96DP5 389 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 RNF31Q96EP0 1072 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TAAR1Q96RJ0 339 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ATP13A3Q9H7F0 1226 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 PTPRJQ12913 1337 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 A8MU76 341 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MEN1O00255 615 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MYL12BO14950 172 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 SNPHO15079 494 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 KPNA5O15131 536 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 GRM6O15303 877 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MPPED1O15442 326 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ATP5HO75947 161 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 GTF2H1P32780 548 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 MLLT3P42568 568 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 NME5P56597 212 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 BNIP1Q12981 228 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 GRM4Q14833 912 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 KIAA0319Q5VV43 1072 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 TRIQKQ629K1 86 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ARL6IP4Q66PJ3 421 aaKnown RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 BNIPLQ7Z465 357 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 CCDC103Q8IW40 242 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 Q8N9G6 341 aaPredicted RBP9.06□□□□□ -0.96
VCAN-208ENST00000512590 LRRC20Q8TCA0 184 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 THAP11Q96EK4 314 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 USP28Q96RU2 1077 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 STRA6Q9BX79 667 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 ELOVL4Q9GZR5 314 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 BRF2Q9HAW0 419 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 SNTG2Q9NY99 539 aa9.06□□□□□ -0.96
VCAN-208ENST00000512590 DKKL1Q9UK85 242 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms