RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CTSOP43234 321 aaPredicted RBP13.16□□□□□ -0.3
COL6A6-203ENST00000511332 CLCN6P51797 869 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 NDST2P52849 883 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 RNF10Q8N5U6 811 aaKnown RBP13.16□□□□□ -0.3
COL6A6-203ENST00000511332 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 MRGPRX3Q96LB0 322 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 SPON2Q9BUD6 331 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 ACE2Q9BYF1 805 aaPredicted RBP13.16□□□□□ -0.3
COL6A6-203ENST00000511332 BCCIPQ9P287 314 aaKnown RBP eCLIP13.16□□□□□ -0.3
COL6A6-203ENST00000511332 EBF1Q9UH73 591 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
COL6A6-203ENST00000511332 ANKRD36A6QL64 1941 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 EDDM13A0A1B0GTR0 161 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 A0A1W2PQF6 199 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 WASH3PC4AMC7 463 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 RASA4BC9J798 803 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 DCLK1O15075 740 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 RASA4O43374 803 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 HLA-EP13747 358 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 TNNT1P13805 278 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 COL9A1P20849 921 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 KDELR1P24390 212 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 NUMBP49757 651 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 STK19P49842 368 aaPredicted RBP13.15□□□□□ -0.3
COL6A6-203ENST00000511332 ARSEP51690 589 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 SLC20A2Q08357 652 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 CCDC173Q0VFZ6 552 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 TCF15Q12870 199 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 CAMK2GQ13555 558 aaPredicted RBP13.15□□□□□ -0.3
COL6A6-203ENST00000511332 HNRNPA1L2Q32P51 320 aaKnown RBP13.15□□□□□ -0.3
COL6A6-203ENST00000511332 ANO7Q6IWH7 933 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 TSSK4Q6SA08 328 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 ZNF662Q6ZS27 426 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
COL6A6-203ENST00000511332 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 FAF2Q96CS3 445 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 MYO19Q96H55 970 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 RPL10LQ96L21 214 aaKnown RBP13.15□□□□□ -0.3
COL6A6-203ENST00000511332 CCDC114Q96M63 670 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
COL6A6-203ENST00000511332 LRRC19Q9H756 370 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 ZSCAN32Q9NX65 697 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 TRIM10Q9UDY6 481 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 HYOU1Q9Y4L1 999 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 PCDHGA2Q9Y5H1 932 aa13.15□□□□□ -0.3
COL6A6-203ENST00000511332 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.31
COL6A6-203ENST00000511332 TARSL2A2RTX5 802 aaKnown RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CCDC66A2RUB6 948 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 KDELR3O43731 214 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ATP9BO43861 1147 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 SNAP91O60641 907 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ZMPSTE24O75844 475 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CD48P09326 243 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 SRCP12931 536 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CTNNA1P35221 906 aaKnown RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ACVRL1P37023 503 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 SERPINH1P50454 418 aaKnown RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ARF5P84085 180 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 SERINC3Q13530 473 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ATP13A4Q4VNC1 1196 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ANKRD20A8PQ5CZ79 823 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 AFMIDQ63HM1 303 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 KIAA1211LQ6NV74 962 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 WDR5BQ86VZ2 330 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 KATNAL2Q8IYT4 538 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 NPWQ8N729 165 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ZNF366Q8N895 744 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 LRRC57Q8N9N7 239 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ATP11CQ8NB49 1132 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 MDGA1Q8NFP4 955 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CASKIN2Q8WXE0 1202 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 NELL1Q92832 810 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 RBM41Q96IZ5 413 aaKnown RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CELF6Q96J87 481 aaKnown RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CEP44Q9C0F1 390 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 PRDM16Q9HAZ2 1276 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 CD248Q9HCU0 757 aa13.14□□□□□ -0.31
COL6A6-203ENST00000511332 POLR3BQ9NW08 1133 aaPredicted RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
COL6A6-203ENST00000511332 A0A0U1RQJ8 604 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 TTC34A8MYJ7 566 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 MIF4GDA9UHW6 222 aaKnown RBP13.13□□□□□ -0.31
COL6A6-203ENST00000511332 H0Y858 1186 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 DFFAO00273 331 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 AXIN1O15169 862 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 RNASEH1O60930 286 aaKnown RBP13.13□□□□□ -0.31
COL6A6-203ENST00000511332 PALMO75781 387 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 GABRG2P18507 467 aa13.13□□□□□ -0.31
COL6A6-203ENST00000511332 NDUFV2P19404 249 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms