RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GNA15P30679 374 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 SLC12A1Q13621 1099 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 MEA1Q16626 185 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 OLFML1Q6UWY5 402 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 TRIM69Q86WT6 500 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 SH2D3CQ8N5H7 860 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 TMEM145Q8NBT3 493 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 CHST14Q8NCH0 376 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 VOPP1Q96AW1 172 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 FZD3Q9NPG1 666 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 DDIT4Q9NX09 232 aa16.36■□□□□ 0.21
RAB40C-202ENST00000509637 ZFR2Q9UPR6 939 aaKnown RBP16.36■□□□□ 0.21
RAB40C-202ENST00000509637 LY6G6EA0A0G2JKS1 128 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 ZNF821O75541 412 aaPredicted RBP16.35■□□□□ 0.21
RAB40C-202ENST00000509637 C1SP09871 688 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 CKMT2P17540 419 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 GLDCP23378 1020 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 FGL2Q14314 439 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 ARHGAP44Q17R89 818 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 PTPN20Q4JDL3 420 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 RNF219Q5W0B1 726 aaPredicted RBP16.35■□□□□ 0.21
RAB40C-202ENST00000509637 TRNP1Q6NT89 227 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 TRIM65Q6PJ69 517 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 KDM7AQ6ZMT4 941 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 PRPF39Q86UA1 669 aaKnown RBP16.35■□□□□ 0.21
RAB40C-202ENST00000509637 RFFLQ8WZ73 363 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 OR8D1Q8WZ84 308 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 FAM204AQ9H8W3 233 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 PIGVQ9NUD9 493 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 TBC1D30Q9Y2I9 924 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
RAB40C-202ENST00000509637 U3KQA8 63 aa16.35■□□□□ 0.21
RAB40C-202ENST00000509637 COL27A1Q8IZC6 1860 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-202ENST00000509637 A0A0D9SEW6 157 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 CASC3O15234 703 aaKnown RBP16.34■□□□□ 0.21
RAB40C-202ENST00000509637 SLC31A1O15431 190 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 ACP1P24666 158 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 CLCN1P35523 988 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 ABCG1P45844 678 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 CLDN2P57739 230 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 CDK17Q00537 523 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 SFSWAPQ12872 951 aaKnown RBP16.34■□□□□ 0.21
RAB40C-202ENST00000509637 ZNF284Q2VY69 593 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 INAVAQ3KP66 663 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 C1orf131Q8NDD1 294 aaKnown RBP16.34■□□□□ 0.21
RAB40C-202ENST00000509637 OR2A12Q8NGT7 310 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 SHC3Q92529 594 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 PPP1R13BQ96KQ4 1090 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 RPRD1AQ96P16 312 aaPredicted RBP16.34■□□□□ 0.21
RAB40C-202ENST00000509637 NRSN2Q9GZP1 204 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 KDM4CQ9H3R0 1056 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 ASNSD1Q9NWL6 643 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 ZNF212Q9UDV6 495 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 PCDHB1Q9Y5F3 818 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 ACTL7AQ9Y615 435 aa16.34■□□□□ 0.21
RAB40C-202ENST00000509637 A0A1W2PQU0 124 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 SLC7A4O43246 635 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 BNIP3LO60238 219 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 BRINP1O60477 761 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 RNGTTO60942 597 aaKnown RBP16.33■□□□□ 0.2
RAB40C-202ENST00000509637 DGKAP23743 735 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 RRM1P23921 792 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 PON1P27169 355 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 CCR1P32246 355 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 ARRB1P49407 418 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-202ENST00000509637 NUCB2P80303 420 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 SULT2A1Q06520 285 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 NME3Q13232 169 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 STIM1Q13586 685 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 RAB6CQ53S08 254 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 SEL1L3Q68CR1 1132 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 OR6B2Q6IFH4 312 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 IQCHQ86VS3 1027 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 CCDC117Q8IWD4 279 aaPredicted RBP16.33■□□□□ 0.2
RAB40C-202ENST00000509637 SLC22A18ASQ8N1D0 253 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 DCBLD1Q8N8Z6 715 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 OR13H1Q8NG92 308 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 SKA1Q96BD8 255 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 NXPE2Q96DL1 559 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 BMFQ96LC9 184 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 NPY6RQ99463 290 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 SIK2Q9H0K1 926 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 RAB6CQ9H0N0 254 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 VPS51Q9UID3 782 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 PCDHGC3Q9UN70 934 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 DMTF1Q9Y222 760 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 HS3ST2Q9Y278 367 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 AK5Q9Y6K8 562 aa16.33■□□□□ 0.2
RAB40C-202ENST00000509637 A0A1W2PNU3 283 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-202ENST00000509637 GOLGA6L4A6NEF3 574 aa16.32■□□□□ 0.2
RAB40C-202ENST00000509637 FOXN3O00409 490 aaPredicted RBP16.32■□□□□ 0.2
RAB40C-202ENST00000509637 RAD51BO15315 384 aa16.32■□□□□ 0.2
RAB40C-202ENST00000509637 YKT6O15498 198 aa16.32■□□□□ 0.2
RAB40C-202ENST00000509637 MED7O43513 233 aa16.32■□□□□ 0.2
RAB40C-202ENST00000509637 GLI1P08151 1106 aa16.32■□□□□ 0.2
RAB40C-202ENST00000509637 NNMTP40261 264 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms