RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SRGAP2O75044 1071 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 ATP1A3P13637 1013 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 GOT1P17174 413 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 C5AR1P21730 350 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 GLDCP23378 1020 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 STAT1P42224 750 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 GRIA4P48058 902 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 PPP2CBP62714 309 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 PPP2CAP67775 309 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 UBXN1Q04323 297 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 ST3GAL2Q16842 350 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 CDO1Q16878 200 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 IL27RAQ6UWB1 636 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 AOPEPQ8N6M6 819 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 NEK11Q8NG66 645 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 OR2T34Q8NGX1 318 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 OR14C36Q8NHC7 312 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 C1orf74Q96LT6 269 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 OSGEPQ9NPF4 335 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 VPS51Q9UID3 782 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 ANKRD6Q9Y2G4 727 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 PAXBP1Q9Y5B6 917 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 ZFHX4Q86UP3 3567 aa14.65□□□□□ -0.06
RAB28-205ENST00000508274 C1QTNF9BB2RNN3 333 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 K7ERQ8 282 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 MBD3O95983 291 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 C1QTNF9P0C862 333 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 SRCP12931 536 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 UNGP13051 313 aaPredicted RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 VASPP50552 380 aaPredicted RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 TYRO3Q06418 890 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 TEAD4Q15561 434 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 CCDC14Q49A88 953 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 LRSAM1Q6UWE0 723 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 LRRC31Q6UY01 552 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 LINGO4Q6UY18 593 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 ARCQ7LC44 396 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 ANKRD20A12PQ8NF67 263 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 OR7D4Q8NG98 312 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 RXFP2Q8WXD0 754 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 OR8D1Q8WZ84 308 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 ERGIC2Q96RQ1 377 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 PPP1R9BQ96SB3 815 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 TMEM121BQ9BXQ6 578 aaPredicted RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 PCOLCE2Q9UKZ9 415 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 HS3ST2Q9Y278 367 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 CHD5Q8TDI0 1954 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 ZZEF1O43149 2961 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 IGF2RP11717 2491 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 LRRC72A6NJI9 287 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 WNT9AO14904 365 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 CBFA2T3O75081 653 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 RTN2O75298 545 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 KRT37O76014 449 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 WNT1P04628 370 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 CTSLP07711 333 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 CDK11BP21127 795 aaKnown RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 RRM1P23921 792 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 OR1E1P30953 314 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 SFSWAPQ12872 951 aaKnown RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 TRIP6Q15654 476 aaKnown RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 ADAT2Q7Z6V5 191 aaKnown RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 SETD3Q86TU7 594 aaPredicted RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 DCAF4L2Q8NA75 395 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 ATP11CQ8NB49 1132 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 PIP4K2CQ8TBX8 421 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 SETD7Q8WTS6 366 aaKnown RBP14.64□□□□□ -0.07
RAB28-205ENST00000508274 HAPLN3Q96S86 360 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 MAGEB5Q9BZ81 275 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 KLK13Q9UKR3 277 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 BTBD3Q9Y2F9 522 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 DAAM1Q9Y4D1 1078 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 PCDHB9Q9Y5E1 797 aa14.64□□□□□ -0.07
RAB28-205ENST00000508274 LRRC10BA6NIK2 292 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 C2CD4BA6NLJ0 364 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 H0Y8X5 98 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 RNF103O00237 685 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 SMAD6O43541 496 aaKnown RBP14.63□□□□□ -0.07
RAB28-205ENST00000508274 ENDOD1O94919 500 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 ZNF883P0CG24 379 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 SDC4P31431 198 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 RACK1P63244 317 aaKnown RBP14.63□□□□□ -0.07
RAB28-205ENST00000508274 KRT83P78385 493 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 IL9RQ01113 521 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 CLEC16AQ2KHT3 1053 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 AGBL4Q5VU57 503 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 UNQ6494/PRO21346Q6UXR6 183 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 TRIM72Q6ZMU5 477 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 CHCHD4Q8N4Q1 142 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 PNPLA1Q8N8W4 532 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 FAM131CQ96AQ9 280 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 C2orf49Q9BVC5 232 aaPredicted RBP14.63□□□□□ -0.07
RAB28-205ENST00000508274 SEPT11Q9NVA2 429 aaKnown RBP14.63□□□□□ -0.07
RAB28-205ENST00000508274 PPM1HQ9ULR3 514 aa14.63□□□□□ -0.07
RAB28-205ENST00000508274 TBC1D3DA0A087WVF3 549 aa14.62□□□□□ -0.07
RAB28-205ENST00000508274 TBC1D3IA0A087WXS9 549 aa14.62□□□□□ -0.07
RAB28-205ENST00000508274 TBC1D3EA0A087X179 549 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms