RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 VPS72Q15906 364 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 GRIK4Q16099 956 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ARHGAP44Q17R89 818 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 FGD3Q5JSP0 725 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PPP1R26Q5T8A7 1209 aaPredicted RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC16A12Q6ZSM3 486 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 USP37Q86T82 979 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 NAT8LQ8N9F0 302 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 FANCBQ8NB91 859 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 DDX54Q8TDD1 881 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 CNBD2Q96M20 576 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SERPINI1Q99574 410 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SEC22CQ9BRL7 303 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 CHID1Q9BWS9 393 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC19A3Q9BZV2 496 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 NAPBQ9H115 298 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PPCSQ9HAB8 311 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 IFT46Q9NQC8 304 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PPARGC1AQ9UBK2 798 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 NARFQ9UHQ1 456 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 TAGLN3Q9UI15 199 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 GLS2Q9UI32 602 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SLC24A2Q9UI40 661 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ZMIZ1Q9ULJ6 1067 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PNMA8BQ9ULN7 279 aaPredicted RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 GNEQ9Y223 722 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 METP08581 1390 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 K7ENM7 598 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ATP2A1O14983 1001 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 GMDSO60547 372 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SNX4O95219 450 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ERBB2P04626 1255 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 YES1P07947 543 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 CD247P20963 164 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 HTR2BP41595 481 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 MGAT3Q09327 533 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 BFSP1Q12934 665 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PLD1Q13393 1074 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 CLEC16AQ2KHT3 1053 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 TEX30Q5JUR7 227 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 UBAP2Q5T6F2 1119 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 ATF7IP2Q5U623 682 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ZNF425Q6IV72 752 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PLEKHM3Q6ZWE6 761 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ZBTB33Q86T24 672 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PPM1KQ8N3J5 372 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PNPT1Q8TCS8 783 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 RAB2BQ8WUD1 216 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 WNT2BQ93097 391 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 TRMT2BQ96GJ1 504 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 ZPBPQ9BS86 351 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11□□□□□ -0.653e-8■■■□□ 14.8
PDLIM5-210ENST00000508216 POLR3BQ9NW08 1133 aaPredicted RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 NYAP2Q9P242 653 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 HEY2Q9UBP5 337 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 KLQ9UEF7 1012 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SPATA2Q9UM82 520 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 PCDHGC3Q9UN70 934 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 ENTPD4Q9Y227 616 aa11□□□□□ -0.65
PDLIM5-210ENST00000508216 SRPRBQ9Y5M8 271 aaKnown RBP11□□□□□ -0.65
PDLIM5-210ENST00000508216 KCNK3O14649 394 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 ZBTB24O43167 697 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 BCAS1O75363 584 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 CCNKO75909 580 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 GSNP06396 782 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 HOXD4P09016 255 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 HSMCR30P0CW71 290 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 ACADMP11310 421 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 CYP11B1P15538 503 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 IL12AP29459 219 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 ACSL1P33121 698 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 SCN4AP35499 1836 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 SOX6P35712 828 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 HMGCLP35914 325 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 MAPK12P53778 367 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 TEKQ02763 1124 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 GNA12Q03113 381 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 DMC1Q14565 340 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 FASTKD3Q14CZ7 662 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 TYSND1Q2T9J0 566 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 ZFP69Q49AA0 526 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 TOM1L2Q6ZVM7 507 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 VN1R5Q7Z5H4 357 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 PARP8Q8N3A8 854 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 LRRC57Q8N9N7 239 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 FBXO25Q8TCJ0 367 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 RNF170Q96K19 258 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 ZNF597Q96LX8 424 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 RBM15Q96T37 977 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 C12orf57Q99622 126 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 CNNM1Q9NRU3 951 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 OLAHQ9NV23 265 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 ARMCX3Q9UH62 379 aaPredicted RBP10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 PSME2Q9UL46 239 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 CDC14AQ9UNH5 594 aa10.99□□□□□ -0.65
PDLIM5-210ENST00000508216 MED16Q9Y2X0 877 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms