RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
PDCD6-204ENST00000506909 CD93Q9NPY3 652 aa13.9□□□□□ -0.18
PDCD6-204ENST00000506909 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
PDCD6-204ENST00000506909 VPS51Q9UID3 782 aa13.9□□□□□ -0.18
PDCD6-204ENST00000506909 DOCK9Q9BZ29 2069 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 WASH4PA8MWX3 477 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 PRPSAP2O60256 369 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 SNAP91O60641 907 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 RNASEH1O60930 286 aaKnown RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 LRCH4O75427 683 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 DNTTP04053 509 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 EPHB2P29323 1055 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 MIPP30301 263 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 PCK1P35558 622 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 MPLP40238 635 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 DPP6P42658 865 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 DHPSP49366 369 aaPredicted RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 NUMBP49757 651 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 SLC20A2Q08357 652 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 ELAVL3Q14576 367 aaKnown RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 CYP4V2Q6ZWL3 525 aaPredicted RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 NIPA2Q8N8Q9 360 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 OR7D4Q8NG98 312 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 MRFAP1L1Q96HT8 127 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 FAM129BQ96TA1 746 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 CHP1Q99653 195 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 NUP85Q9BW27 656 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 ACE2Q9BYF1 805 aaPredicted RBP13.89□□□□□ -0.19
PDCD6-204ENST00000506909 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 DEF6Q9H4E7 631 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 IP6K2Q9UHH9 426 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 AP4E1Q9UPM8 1137 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 CACNA1EQ15878 2313 aa13.89□□□□□ -0.19
PDCD6-204ENST00000506909 FGF10O15520 208 aaPredicted RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 CREB3O43889 395 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 AKR1B10O60218 316 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 NDUFS2O75306 463 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ZMPSTE24O75844 475 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 H2AFZP0C0S5 128 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 SRCP12931 536 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 PTGER3P43115 390 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 CLCN6P51797 869 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ZNF75DP51815 510 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 CREB5Q02930 508 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ZNF33AQ06730 810 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 SFSWAPQ12872 951 aaKnown RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 DLG2Q15700 870 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 TTC31Q49AM3 519 aaPredicted RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ACCSLQ4AC99 568 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 BOLA3Q53S33 107 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 RETSATQ6NUM9 610 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 USP30Q70CQ3 517 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 H2AFVQ71UI9 128 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 TC2NQ8N9U0 490 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 CADM4Q8NFZ8 388 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ARHGEF2Q92974 986 aaKnown RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 TOE1Q96GM8 510 aaKnown RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 SNRNP25Q9BV90 132 aaKnown RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 PCED1AQ9H1Q7 454 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 CATSPERBQ9H7T0 1116 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 NHEJ1Q9H9Q4 299 aaPredicted RBP13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ATP13A1Q9HD20 1204 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 DONSONQ9NYP3 566 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 PCSK1NQ9UHG2 260 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 DNAI1Q9UI46 699 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 ANAPC7Q9UJX3 599 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 USP18Q9UMW8 372 aa13.88□□□□□ -0.19
PDCD6-204ENST00000506909 SHROOM3Q8TF72 1996 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 MED19A0JLT2 244 aaPredicted RBP13.87□□□□□ -0.19
PDCD6-204ENST00000506909 MYO1FO00160 1098 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 CBX4O00257 560 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 MCF2LO15068 1137 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 ALOX15BO15296 676 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 MT-CO1P00395 513 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 VAV1P15498 845 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 GLDCP23378 1020 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 HOXD12P35452 270 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 YBEYP58557 167 aaPredicted RBP13.87□□□□□ -0.19
PDCD6-204ENST00000506909 TPI1P60174 286 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 LMNB2Q03252 620 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 POLD3Q15054 466 aaPredicted RBP13.87□□□□□ -0.19
PDCD6-204ENST00000506909 CST6Q15828 149 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 CA9Q16790 459 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 PEAR1Q5VY43 1037 aaPredicted RBP13.87□□□□□ -0.19
PDCD6-204ENST00000506909 LYSMD4Q5XG99 296 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 IL31Q6EBC2 164 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 PRR23CQ6ZRP0 262 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 CYP2U1Q7Z449 544 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 CACUL1Q86Y37 369 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 SYT12Q8IV01 421 aa13.87□□□□□ -0.19
PDCD6-204ENST00000506909 MMAAQ8IVH4 418 aaKnown RBP13.87□□□□□ -0.19
PDCD6-204ENST00000506909 SLC41A1Q8IVJ1 513 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms