RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 CACNA1GO43497 2377 aa25.35■■□□□ 1.65
HERC4-212ENST00000505760 DOCK9Q9BZ29 2069 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 TLR4O00206 839 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 MCF2LO15068 1137 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 ALOX15BO15296 676 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 YKT6O15498 198 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 PLRG1O43660 514 aaKnown RBP25.34■■□□□ 1.65
HERC4-212ENST00000505760 MAT2AP31153 395 aaKnown RBP25.34■■□□□ 1.65
HERC4-212ENST00000505760 CXCR3P49682 368 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 KRT83P78385 493 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 CNTN1Q12860 1018 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 DRAP1Q14919 205 aaPredicted RBP25.34■■□□□ 1.65
HERC4-212ENST00000505760 DPCR1Q3MIW9 517 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 C5orf22Q49AR2 442 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 MIIPQ5JXC2 388 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 OTUD1Q5VV17 481 aaPredicted RBP25.34■■□□□ 1.65
HERC4-212ENST00000505760 NAPEPLDQ6IQ20 393 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 SH2D3CQ8N5H7 860 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 PIP4K2CQ8TBX8 421 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 FAM131CQ96AQ9 280 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 C18orf8Q96DM3 657 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 ARHGEF38Q9NXL2 777 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 DACH1Q9UI36 760 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 PPM1HQ9ULR3 514 aa25.34■■□□□ 1.65
HERC4-212ENST00000505760 COL5A1P20908 1838 aaPredicted RBP25.34■■□□□ 1.65
HERC4-212ENST00000505760 CNTN5O94779 1100 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 F9P00740 461 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 RHOCP08134 193 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 CYP11B1P15538 503 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 TFE3P19532 575 aaPredicted RBP25.33■■□□□ 1.65
HERC4-212ENST00000505760 DEUP1Q05D60 604 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 FAM102AQ5T9C2 384 aaPredicted RBP25.33■■□□□ 1.65
HERC4-212ENST00000505760 LRRC31Q6UY01 552 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 MARCH9Q86YJ5 346 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 SAP25Q8TEE9 199 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 C2orf49Q9BVC5 232 aaPredicted RBP25.33■■□□□ 1.65
HERC4-212ENST00000505760 CHMP5Q9NZZ3 219 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 FARP1Q9Y4F1 1045 aaPredicted RBP25.33■■□□□ 1.65
HERC4-212ENST00000505760 FHOD1Q9Y613 1164 aa25.33■■□□□ 1.65
HERC4-212ENST00000505760 APC2O95996 2303 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 ERCC5P28715 1186 aaPredicted RBP25.32■■□□□ 1.64
HERC4-212ENST00000505760 CDH5P33151 784 aaPredicted RBP25.32■■□□□ 1.64
HERC4-212ENST00000505760 NUDT1P36639 197 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 NXPH1P58417 271 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 ALFQ53S48 1182 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 AGBL4Q5VU57 503 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 TAF3Q5VWG9 929 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 DHRS13Q6UX07 377 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 ERICH1Q86X53 443 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 MFSD2AQ8NA29 543 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 ATP11CQ8NB49 1132 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 NT5C3BQ969T7 300 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 CCDC114Q96M63 670 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 ANLNQ9NQW6 1124 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 ARHGAP20Q9P2F6 1191 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 DMTF1Q9Y222 760 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 HS3ST2Q9Y278 367 aa25.32■■□□□ 1.64
HERC4-212ENST00000505760 CELSR3Q9NYQ7 3312 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 FAM170AA1A519 330 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 FAM149AA5PLN7 773 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 ENC1O14682 589 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 LDOC1O95751 146 aaPredicted RBP25.31■■□□□ 1.64
HERC4-212ENST00000505760 SRCP12931 536 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 SCNN1AP37088 669 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 GABRB2P47870 512 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 SHBQ15464 509 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 SMAD1Q15797 465 aaKnown RBP25.31■■□□□ 1.64
HERC4-212ENST00000505760 SLC25A52Q3SY17 297 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 KLHDC7AQ5VTJ3 777 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 DPY19L2P1Q6NXN4 242 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 SETD3Q86TU7 594 aaPredicted RBP25.31■■□□□ 1.64
HERC4-212ENST00000505760 TRIM69Q86WT6 500 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 OXR1Q8N573 874 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 MSANTD4Q8NCY6 345 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 PGAP3Q96FM1 320 aaPredicted RBP25.31■■□□□ 1.64
HERC4-212ENST00000505760 CNDP2Q96KP4 475 aaKnown RBP25.31■■□□□ 1.64
HERC4-212ENST00000505760 TBCBQ99426 244 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 ERVMER34-1Q9H9K5 563 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 TMEM51Q9NW97 253 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 SNX10Q9Y5X0 201 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 ADAMTS20P59510 1910 aa25.31■■□□□ 1.64
HERC4-212ENST00000505760 SNAP91O60641 907 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 MAGEC1O60732 1142 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 MT-CO1P00395 513 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 EPHA8P29322 1005 aaPredicted RBP25.3■■□□□ 1.64
HERC4-212ENST00000505760 KCNMA1Q12791 1236 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 STAT4Q14765 748 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 SETMARQ53H47 684 aaPredicted RBP25.3■■□□□ 1.64
HERC4-212ENST00000505760 ACBD5Q5T8D3 534 aaPredicted RBP25.3■■□□□ 1.64
HERC4-212ENST00000505760 XYLT1Q86Y38 959 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 EID2Q8N6I1 236 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 PSMB7Q99436 277 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 VPS51Q9UID3 782 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 DOCK4Q8N1I0 1966 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 KNTC1P50748 2209 aa25.3■■□□□ 1.64
HERC4-212ENST00000505760 TRABD2BA6NFA1 517 aa25.29■■□□□ 1.64
HERC4-212ENST00000505760 GOLGA8SH3BPF8 625 aa25.29■■□□□ 1.64
HERC4-212ENST00000505760 I6L893 689 aaPredicted RBP25.29■■□□□ 1.64
HERC4-212ENST00000505760 LSM8O95777 96 aaKnown RBP25.29■■□□□ 1.64
HERC4-212ENST00000505760 C6orf118Q5T5N4 469 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms