RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MED22Q15528 200 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 GSTA3Q16772 222 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 ERCC6LQ2NKX8 1250 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 TBC1D25Q3MII6 688 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 GXYLT1Q4G148 440 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMEM63BQ5T3F8 832 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 GJB7Q6PEY0 223 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 KLHL35Q6PF15 583 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 GALNT7Q86SF2 657 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 SCN4BQ8IWT1 228 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 TEX11Q8IYF3 940 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 TTC30BQ8N4P2 665 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 C11orf65Q8NCR3 313 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 RP9Q8TA86 221 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 FUBP1Q96AE4 644 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 INTS12Q96CB8 462 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 VMP1Q96GC9 406 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 CCDC34Q96HJ3 373 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 PGBD1Q96JS3 809 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 CMTM3Q96MX0 182 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 PRR25Q96S07 402 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 CLSTN3Q9BQT9 956 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 ADPGKQ9BRR6 497 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 ELOVL1Q9BW60 279 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 TEX12Q9BXU0 123 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 RNF26Q9BY78 433 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 SIL1Q9H173 461 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 OR10A4Q9H209 315 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 RABEP2Q9H5N1 569 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 SFXN1Q9H9B4 322 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 AKIP1Q9NQ31 210 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 SLC35C2Q9NQQ7 365 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 CCDC177Q9NQR7 707 aaPredicted RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 EHD3Q9NZN3 535 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 VPS4AQ9UN37 437 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 MAP3K2Q9Y2U5 619 aa4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 REXO2Q9Y3B8 237 aaKnown RBP4.15□□□□□ -1.74
TRAPPC13-208ENST00000505553 FAM237BA0A1B0GVD1 139 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 A0A1W2PQ09 198 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 AP4M1O00189 453 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 SH2B2O14492 632 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 HBP1O60381 514 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 NCR1O76036 304 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 CSPG5O95196 566 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 HSPA4LO95757 839 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 C1RP00736 705 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 TUBB4AP04350 444 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 LYL1P12980 280 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 HOXB9P17482 250 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 SAT1P21673 171 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 PRPH2P23942 346 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 GSTM2P28161 218 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 EEF1DP29692 281 aaKnown RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 SLC8A1P32418 973 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 ICAM3P32942 547 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 GJC1P36383 396 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 BMPR1AP36894 532 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 UBA7P41226 1012 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 MTNR1AP48039 350 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 CLCN2P51788 898 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 E2F1Q01094 437 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 CYP1B1Q16678 543 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 DPCR1Q3MIW9 517 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 RABL3Q5HYI8 236 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 SH2D4BQ5SQS7 431 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 TMEM81Q6P7N7 255 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 DPY19L3Q6ZPD9 716 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 PARS2Q7L3T8 475 aaKnown RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 KDELC2Q7Z4H8 507 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 C12orf76Q8N812 135 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 TOR1AIP2Q8NFQ8 470 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 LPIN2Q92539 896 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 PTCD3Q96EY7 689 aaKnown RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 PRR11Q96HE9 360 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 KLHL15Q96M94 604 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 MAP7D2Q96T17 732 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 USP29Q9HBJ7 922 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 KLC4Q9NSK0 619 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 ABHD10Q9NUJ1 306 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 MRGBPQ9NV56 204 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 TBCCD1Q9NVR7 557 aa4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 MRPL15Q9P015 296 aaKnown RBP4.14□□□□□ -1.75
TRAPPC13-208ENST00000505553 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 TMEM191CA6NGB0 347 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 EIF3CLB5ME19 914 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 CLGNO14967 610 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PROM1O43490 865 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PDE8BO95263 885 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PKMP14618 531 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 DDX6P26196 483 aaKnown RBP eCLIP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 GARSP41250 739 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 DPP6P42658 865 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 RAE1P78406 368 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 AIMP1Q12904 312 aaKnown RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 CDC37Q16543 378 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 SLC18A3Q16572 532 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 BEAN1Q3B7T3 259 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 BMP2KLQ5H9B9 411 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 RAB41Q5JT25 222 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PLAC9Q5JTB6 97 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms