RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 GATMP50440 423 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 PTP4A2Q12974 167 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 GTF2H3Q13889 308 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 CAPRIN1Q14444 709 aaKnown RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 HIC1Q14526 733 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 SPATA6LQ8N4H0 392 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 PDZD8Q8NEN9 1154 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 SPATA22Q8NHS9 363 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 GRIN3AQ8TCU5 1115 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ZNF296Q8WUU4 475 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ZNF75CPQ92670 426 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ZIC5Q96T25 663 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 KPNA3O00505 521 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ZNF197O14709 1029 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 MAP3K7O43318 606 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ADH1AP07327 375 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 HSPA8P11142 646 aaKnown RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 CNTFP26441 200 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 HDAC4P56524 1084 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 GHRHRQ02643 423 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 LPIN1Q14693 890 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 BRMS1LQ5PSV4 323 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 PDPK2PQ6A1A2 396 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 GLIS1Q8NBF1 620 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ADAMTS10Q9H324 1103 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 C12orf65Q9H3J6 166 aaKnown RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ACSS3Q9H6R3 686 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 SLCO1B3Q9NPD5 702 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 ABL2P42684 1182 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 WNT3AP56704 352 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 NDNQ99608 321 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 TMEM120AQ9BXJ8 343 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 GRHL1Q9NZI5 618 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 NOP53Q9NZM5 478 aaKnown RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 MRPS23Q9Y3D9 190 aaKnown RBP14.34□□□□□ -0.11
TCOF1-207ENST00000504761 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 MYH8P13535 1937 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 A0A1W2PQ45 241 aaPredicted RBP14.33□□□□□ -0.11
TCOF1-207ENST00000504761 A0A1W2PQY0 241 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 XYLBO75191 536 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 MAP2K2P36507 400 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 SERPINB5P36952 375 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 BCL2L1Q07817 233 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 TEX44Q53QW1 395 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 LRRC8EQ6NSJ5 796 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 TMEM110Q86TL2 294 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 LCA5Q86VQ0 697 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 SLC35F5Q8WV83 523 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 FOPNLQ96NB1 174 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 SLC4A5Q9BY07 1137 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 PIGVQ9NUD9 493 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 WWOXQ9NZC7 414 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 PGAP2Q9UHJ9 254 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 ANGPTL2Q9UKU9 493 aa14.33□□□□□ -0.11
TCOF1-207ENST00000504761 PAPPAQ13219 1627 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 ANGPT2O15123 496 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 STBD1O95210 358 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 KCNE1P15382 129 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 GALNT3Q14435 633 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 GRTP1Q5TC63 336 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 ZNF280BQ86YH2 543 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 SNX31Q8N9S9 440 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 TUBGCP3Q96CW5 907 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 C2orf49Q9BVC5 232 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-207ENST00000504761 PRKD2Q9BZL6 878 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 CACYBPQ9HB71 228 aaKnown RBP14.33□□□□□ -0.12
TCOF1-207ENST00000504761 PTPRHQ9HD43 1115 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 SCN9AQ15858 1988 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 NOL3O60936 208 aaKnown RBP14.33□□□□□ -0.12
TCOF1-207ENST00000504761 GUCA1CO95843 209 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 FMO4P31512 558 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 BTKQ06187 659 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 CMC1Q7Z7K0 106 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 CPNE1Q99829 537 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.33□□□□□ -0.12
TCOF1-207ENST00000504761 VPS9D1Q9Y2B5 631 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 MT-CYBP00156 380 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-207ENST00000504761 APOA4P06727 396 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 PAX3P23760 479 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 PCID2Q5JVF3 399 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 CCDC149Q6ZUS6 474 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 NAT16Q8N8M0 369 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 PIP4K2CQ8TBX8 421 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.12
TCOF1-207ENST00000504761 E9PAM4 449 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 GPR32O75388 356 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 SKOR1P84550 965 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 XRCC4Q13426 336 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 AARS2Q5JTZ9 985 aaKnown RBP14.32□□□□□ -0.12
TCOF1-207ENST00000504761 AGMOQ6ZNB7 445 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 NSL1Q96IY1 281 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 SPATA17Q96L03 361 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 ARMCX1Q9P291 453 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 MYH4Q9Y623 1939 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 POU5F1Q01860 360 aaKnown RBP14.32□□□□□ -0.12
TCOF1-207ENST00000504761 ARMC12Q5T9G4 340 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 LINGO4Q6UY18 593 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 268.8 ms