RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 BRWD1Q9NSI6 2320 aa10.64□□□□□ -0.71
TPM3-217ENST00000504663 E7ESA3 106 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 J3KR12 359 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 DFFAO00273 331 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 ZNF197O14709 1029 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 MATN3O15232 486 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 OPHN1O60890 802 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 PPFIA2O75334 1257 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 CLDN11O75508 207 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 ZMPSTE24O75844 475 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 PENKP01210 267 aaPredicted RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 HLA-DQB2P05538 268 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 GLDCP23378 1020 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 CCNCP24863 283 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 ADCY8P40145 1251 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 AP1B1Q10567 949 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 MORF4L2Q15014 288 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 GAB4Q2WGN9 574 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 PARP15Q460N3 678 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 ARHGAP15Q53QZ3 475 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 RABGAP1LQ5R372 815 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 TTC39BQ5VTQ0 682 aaPredicted RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 KCTD11Q693B1 232 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 HEATR6Q6AI08 1181 aaKnown RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 HOOK3Q86VS8 718 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 ZCCHC9Q8N567 271 aaKnown RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 TAB3Q8N5C8 712 aaPredicted RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 ATPAF2Q8N5M1 289 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 TEX26Q8N6G2 289 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 HJURPQ8NCD3 748 aaPredicted RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 OR7D4Q8NG98 312 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 TEKT5Q96M29 485 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 FMO2Q99518 471 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 MLPHQ9BV36 600 aaPredicted RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 ETNK1Q9HBU6 452 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 TDP1Q9NUW8 608 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 IPO11Q9UI26 975 aaKnown RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 ZMYM5Q9UJ78 669 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 SHOC2Q9UQ13 582 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 MRPS23Q9Y3D9 190 aaKnown RBP10.63□□□□□ -0.71
TPM3-217ENST00000504663 ACTL7AQ9Y615 435 aa10.63□□□□□ -0.71
TPM3-217ENST00000504663 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 CHADO15335 359 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 ZBTB24O43167 697 aaPredicted RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 PRAMEF11O60813 436 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 RAMP2O60895 175 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 TBL1XO60907 577 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 LUC7L3O95232 432 aaKnown RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 TPSB2P20231 275 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 FSHRP23945 695 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 PSMB4P28070 264 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 AVPR1AP37288 418 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 MAGEA3P43357 314 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 YBEYP58557 167 aaPredicted RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 GNA12Q03113 381 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 HLTFQ14527 1009 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPM3-217ENST00000504663 TPSAB1Q15661 275 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 MSS51Q4VC12 460 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 TEX44Q53QW1 395 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 FAM78AQ5JUQ0 283 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 SETD3Q86TU7 594 aaPredicted RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 RELL1Q8IUW5 271 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 LRRC49Q8IUZ0 686 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 ARID3BQ8IVW6 561 aaPredicted RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 PGBD5Q8N414 524 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 KIAA1958Q8N8K9 716 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 FGF13Q92913 245 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 VOPP1Q96AW1 172 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 TADA1Q96BN2 335 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 NSMCE3Q96MG7 304 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 ASB16Q96NS5 453 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 MYADMQ96S97 322 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 GBA3Q9H227 469 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 LINC00597Q9H2U6 94 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 TRPV4Q9HBA0 871 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 PLAC1Q9HBJ0 212 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 ARGLU1Q9NWB6 273 aaPredicted RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 MARK1Q9P0L2 795 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 LSM7Q9UK45 103 aaKnown RBP10.62□□□□□ -0.71
TPM3-217ENST00000504663 ZNF510Q9Y2H8 683 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 ATP8A1Q9Y2Q0 1164 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 SH3BP1Q9Y3L3 701 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 MIA3Q5JRA6 1907 aa10.62□□□□□ -0.71
TPM3-217ENST00000504663 XIRP2A4UGR9 3374 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ILVBLA1L0T0 632 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ARHGAP42A6NI28 874 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 MUSKO15146 869 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ERLIN1O75477 346 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 BANF1O75531 89 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 JCHAINP01591 159 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 MMP2P08253 660 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 NFKB1P19838 968 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 MZF1P28698 734 aaPredicted RBP10.61□□□□□ -0.71
TPM3-217ENST00000504663 OR1E1P30953 314 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 VIPR2P41587 438 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 GRIA1P42261 906 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 IFNAR2P48551 515 aa10.61□□□□□ -0.71
TPM3-217ENST00000504663 ARF5P84085 180 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms