RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ZIM3Q96PE6 472 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 GCNAQ96QF7 691 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 IL12RB2Q99665 862 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 MLPHQ9BV36 600 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 BRD8Q9H0E9 1235 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 CDC42EP4Q9H3Q1 356 aaKnown RBP7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 TASP1Q9H6P5 420 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 VIPAS39Q9H9C1 493 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 NINJ2Q9NZG7 142 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 SEPT10Q9P0V9 454 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 IGSF9Q9P2J2 1179 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 CLEC4EQ9ULY5 219 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 TBC1D30Q9Y2I9 924 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 ATP8A1Q9Y2Q0 1164 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 OR51B4Q9Y5P0 310 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 ACTL7AQ9Y615 435 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 SZT2Q5T011 3432 aa7.06□□□□□ -1.28
TOPBP1-203ENST00000503464 MUC22E2RYF6 1773 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 A0A1B0GVM2 712 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TCAF2A6NFQ2 919 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 MUSKO15146 869 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 MATN3O15232 486 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 RIPK2O43353 540 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 RAMP2O60895 175 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 AVILO75366 819 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 GJB3O75712 270 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 FGF19O95750 216 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 SYF2O95926 243 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 JCHAINP01591 159 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 SHBGP04278 402 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 CCNB1P14635 433 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TCF3P15923 654 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 NFKB1P19838 968 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TPSB2P20231 275 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 GLDCP23378 1020 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 DDX6P26196 483 aaKnown RBP eCLIP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 OR1E1P30953 314 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 RGS19P49795 217 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 GNA12Q03113 381 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TNK2Q07912 1038 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 ZNF844Q08AG5 666 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 SLC10A7Q0GE19 358 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 SERINC3Q13530 473 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 CBX2Q14781 532 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 POLD3Q15054 466 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TPSAB1Q15661 275 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 PARP15Q460N3 678 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 RABGAP1LQ5R372 815 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 HP1BP3Q5SSJ5 553 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 LEKR1Q6ZMV7 388 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 ARHGEF18Q6ZSZ5 1173 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 CHST9Q7L1S5 443 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 OTOP3Q7RTS5 596 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 PCGF5Q86SE9 256 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 CCDC25Q86WR0 208 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 PGBD5Q8N414 524 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 CPXM2Q8N436 756 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TEX26Q8N6G2 289 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 LEMD2Q8NC56 503 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 OR7D4Q8NG98 312 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 USP33Q8TEY7 942 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 ARHGEF2Q92974 986 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 ALG14Q96F25 216 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 OXNAD1Q96HP4 312 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 LMLNQ96KR4 655 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 AGAP3Q96P47 875 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 SERPINB12Q96P63 405 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 RBM15Q96T37 977 aaKnown RBP eCLIP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 CDCA3Q99618 268 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 APOL5Q9BWW9 433 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 FOXP3Q9BZS1 431 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 GBA3Q9H227 469 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 TTYH1Q9H313 450 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 PABPC3Q9H361 631 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 SFXN1Q9H9B4 322 aa7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 EIF2B3Q9NR50 452 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 KLHL8Q9P2G9 620 aaPredicted RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 MTRF1LQ9UGC7 380 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 IPO11Q9UI26 975 aaKnown RBP7.05□□□□□ -1.28
TOPBP1-203ENST00000503464 COL4A2P08572 1712 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 E2F8A0AVK6 867 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ARHGAP42A6NI28 874 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ALOX15BO15296 676 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 MTSS1O43312 755 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PRAMEF11O60813 436 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TBL1XO60907 577 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TBX10O75333 385 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 CLDN11O75508 207 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ZMPSTE24O75844 475 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 LUC7L3O95232 432 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 CD160O95971 181 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 C1QAP02745 245 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 APRTP07741 180 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 MMP2P08253 660 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 NUDT17P0C025 328 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 FCARP24071 287 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 MZF1P28698 734 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 FDFT1P37268 417 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms