RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 NFYCQ13952 458 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM110CQ1W6H9 321 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC10A6Q3KNW5 377 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 CARNMT1Q8N4J0 409 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 ARRDC4Q8NCT1 418 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 FIZ1Q96SL8 496 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 CLPBQ9H078 707 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 STARD7Q9NQZ5 370 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC13A4Q9UKG4 626 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 SNX13Q9Y5W8 968 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 DNM1LO00429 736 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 LTA4HP09960 611 aaKnown RBP10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 FCGR1AP12314 374 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 CLCN5P51795 746 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 CACNA2D1P54289 1103 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 BRMS1LQ5PSV4 323 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC41A1Q8IVJ1 513 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 FITM2Q8N6M3 262 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 SEC14L1Q92503 715 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 UNKQ9C0B0 810 aaKnown RBP10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 ADNPQ9H2P0 1102 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 ST3GAL5Q9UNP4 418 aa10.95□□□□□ -0.66
LIMCH1-205ENST00000503057 BTAF1O14981 1849 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 NFKBIEO00221 500 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ATG7O95352 703 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ITGALP20701 1170 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ME2P23368 584 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 PTDSS1P48651 473 aaKnown RBP10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 GDF10P55107 478 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 RHOAP61586 193 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM187BQ17R55 369 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM171A1Q5VUB5 890 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 VSTM1Q6UX27 236 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 CLNKQ7Z7G1 428 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 DLG3Q92796 817 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 PPP1R10Q96QC0 940 aaKnown RBP10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ECSITQ9BQ95 431 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 NFKBIZQ9BYH8 718 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 TAS2R13Q9NYV9 303 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 MFSD11O43934 449 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 PEX10O60683 326 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ASMTLO95671 621 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ZCCHC18P0CG32 403 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 SCNN1BP51168 640 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 RAB10P61026 200 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 TAF5Q15542 800 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ALYREFQ86V81 257 aaKnown RBP10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 KAT2BQ92831 832 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 MECRQ9BV79 373 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM105AQ9NUU6 356 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 CROTQ9UKG9 612 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 RAP2CQ9Y3L5 183 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 CBX4O00257 560 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 CABYRO75952 493 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 GRIK3Q13003 919 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 LIPMQ5VYY2 423 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ARHGAP17Q68EM7 881 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 C10orf107Q8IVU9 208 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM9CQ8IZT9 166 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 BCO2Q9BYV7 579 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 ATXN3LQ9H3M9 355 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 DYRK4Q9NR20 520 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 APPL1Q9UKG1 709 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 PDE5AO76074 875 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 COX4I1P13073 169 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC18A1P54219 525 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 GBE1Q04446 702 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 GTF2H3Q13889 308 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 KRT72Q14CN4 511 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 INTS6LQ5JSJ4 861 aaKnown RBP10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 FBXO39Q8N4B4 442 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 TMEM169Q96HH4 297 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 VPS50Q96JG6 964 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC25A23Q9BV35 468 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 MRPL9Q9BYD2 267 aaKnown RBP10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 PDGFDQ9GZP0 370 aaPredicted RBP10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 VPS28Q9UK41 221 aa10.94□□□□□ -0.66
LIMCH1-205ENST00000503057 FOXO6A8MYZ6 492 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ATP5F1P24539 256 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ADRA1BP35368 520 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 GPD2P43304 727 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 GRIA4P48058 902 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 PSEN1P49768 467 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 INHBEP58166 350 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ST8SIA6P61647 398 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ACBD5Q5T8D3 534 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM45BPQ6NSW5 357 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 TTC33Q6PID6 262 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 NAT8LQ8N9F0 302 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 LPCAT1Q8NF37 534 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 OR6Y1Q8NGX8 325 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM45AQ8TCE6 357 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 HNRNPABQ99729 332 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 MRPL57Q9BQC6 102 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 RUBCNLQ9H714 662 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC12A4Q9UP95 1085 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 LRG1P02750 347 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms