RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 LRRC71Q8N4P6 559 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 DNAJC5GQ8N7S2 189 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 SNX19Q92543 992 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 GFM2Q969S9 779 aaKnown RBP5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 MTMR12Q9C0I1 747 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 HOXD1Q9GZZ0 328 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 KLC2Q9H0B6 622 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 STMN4Q9H169 189 aaPredicted RBP5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 C12orf4Q9NQ89 552 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 OLAHQ9NV23 265 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 ASIC3Q9UHC3 531 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 PCYOX1Q9UHG3 505 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 POMPQ9Y244 141 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 ERGIC3Q9Y282 383 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 PCDHGA7Q9Y5G6 932 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 CPQQ9Y646 472 aa5.9□□□□□ -1.46
SOX2-OT-218ENST00000498731 ACSL4O60488 711 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 H2AFZP0C0S5 128 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GALNSP34059 522 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 HADHAP40939 763 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 LIG4P49917 911 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 NR1H2P55055 460 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 P2RX3P56373 397 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 JAM2P57087 298 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 MRPS22P82650 360 aaKnown RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 MYL7Q01449 175 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PRKCEQ02156 737 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PMS2P3Q13401 168 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 SNTA1Q13424 505 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 DHX34Q14147 1143 aaKnown RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 DLG2Q15700 870 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZCCHC23Q6ZST2 131 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 H2AFVQ71UI9 128 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF720Q7Z2F6 126 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 CROCCP3Q8IVE0 287 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 FBXO16Q8IX29 292 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIML2Q8N7C3 387 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 LEMD2Q8NC56 503 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM156AQ8NDB6 213 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC20A1Q8WUM9 679 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 COPS5Q92905 334 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 NLRP4Q96MN2 994 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ACCSQ96QU6 501 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PKP2Q99959 881 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM213AQ9BRX8 229 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCDC106Q9BWC9 280 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 SIX2Q9NPC8 291 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 UBE2TQ9NPD8 197 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ITM2CQ9NQX7 267 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 THAP1Q9NVV9 213 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ABI2Q9NYB9 513 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 DAPK2Q9UIK4 370 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ITGB1BP2Q9UKP3 347 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF214Q9UL59 606 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GTF2A1LQ9UNN4 478 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRAF6Q9Y4K3 522 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 SNCAIPQ9Y6H5 919 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 DICER1Q9UPY3 1922 aaKnown RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 SF3B1O75533 1304 aaKnown RBP eCLIP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 ARHGAP10A1A4S6 786 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 A8MUA0 341 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GOLGA8SH3BPF8 625 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GOLGA8MH3BSY2 632 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PDXKO00764 312 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 KMOO15229 486 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 DYNC1LI2O43237 492 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 CDH16O75309 829 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 KRT75O95678 551 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PLS3P13797 630 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GMPRP36959 345 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 YAP1P46937 504 aaKnown RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 POU6F2P78424 691 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GALK2Q01415 458 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GALNT2Q10471 571 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 LAMC2Q13753 1193 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TFDP1Q14186 410 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 C15orf59Q2T9L4 293 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PPM1LQ5SGD2 360 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM219BQ5XKK7 198 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCDC62Q6P9F0 684 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRMT10CQ7L0Y3 403 aaKnown RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TAS2R42Q7RTR8 314 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 CCDC60Q8IWA6 550 aaPredicted RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRAPPC12Q8WVT3 735 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TTC17Q96AE7 1141 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 C1orf74Q96LT6 269 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 MBOAT7Q96N66 472 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 BIRC8Q96P09 236 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 TSSK1BQ9BXA7 367 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 SPATC1LQ9H0A9 340 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 KCTD10Q9H3F6 313 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 MANSC1Q9H8J5 431 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 C10orf88Q9H8K7 445 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 AGPAT3Q9NRZ7 376 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 QPCTLQ9NXS2 382 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 PGAP2Q9UHJ9 254 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 EIF2B4Q9UI10 523 aaKnown RBP5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 DNAJC12Q9UKB3 198 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 GTF3C4Q9UKN8 822 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms