RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ERVPABLB-1P60509 514 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 BIRC3Q13489 604 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 ALCAMQ13740 583 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 STK38Q15208 465 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 SNRNP35Q16560 246 aaKnown RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 SKIDA1Q1XH10 827 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 HECTD3Q5T447 861 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TPGS1Q6ZTW0 290 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TRMT11Q7Z4G4 463 aaKnown RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TMEM25Q86YD3 366 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 WDR49Q8IV35 697 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 CHPFQ8IZ52 775 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 NUP93Q8N1F7 819 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 RFFLQ8WZ73 363 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 SNX19Q92543 992 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TCF12Q99081 682 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 CGRRF1Q99675 332 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 GABRG3Q99928 467 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TTLL2Q9BWV7 592 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 TRIM9Q9C026 710 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 MKRN2Q9H000 416 aaKnown RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 SMYD3Q9H7B4 428 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 UPF2Q9HAU5 1272 aaKnown RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 EHD2Q9NZN4 543 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 USP36Q9P275 1121 aaKnown RBP5.81□□□□□ -1.48
SPTA1-209ENST00000498708 DEC1Q9P2X7 70 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 NUDT5Q9UKK9 219 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 KIF26BQ2KJY2 2108 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 PLXNA2O75051 1894 aa5.81□□□□□ -1.48
SPTA1-209ENST00000498708 HIVEP1P15822 2718 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 A0A1W2PNU3 283 aaPredicted RBP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 PRRT4C9JH25 899 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 NEDD8-MDP1E9PL57 170 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 TGFB1I1O43294 461 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 NDUFB5O43674 189 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 EXOC3O60645 756 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 USP12O75317 370 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 BEST1O76090 585 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 KIF20AO95235 890 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 OLFM2O95897 454 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 TBX18O95935 607 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 B3GALT4O96024 378 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 ITGAVP06756 1048 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 HMBSP08397 361 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 CCDC130P13994 396 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 ADORA2BP29275 332 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 GRIA4P48058 902 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 LSSP48449 732 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 PPP3CCP48454 512 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 TPMTP51580 245 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SLC5A3P53794 718 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 MAP3K7CLP57077 242 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 NOP14P78316 857 aaKnown RBP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 CYP24A1Q07973 514 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SPRED3Q2MJR0 410 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 INAVAQ3KP66 663 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 ZSCAN23Q3MJ62 389 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 FUT11Q495W5 492 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 FAM26FQ5R3K3 315 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 GRAMD4Q6IC98 578 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SDE2Q6IQ49 451 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 PAQR9Q6ZVX9 377 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 STXBP4Q6ZWJ1 553 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 LIMS2Q7Z4I7 341 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 ACOT1Q86TX2 421 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 DDX42Q86XP3 938 aaKnown RBP eCLIP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 CACUL1Q86Y37 369 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SRRM1Q8IYB3 904 aaKnown RBP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 CNPY4Q8N129 248 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 XXYLT1Q8NBI6 393 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 B3GALNT2Q8NCR0 500 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 PLEKHO2Q8TD55 490 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SAP25Q8TEE9 199 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 CITED4Q96RK1 184 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SEMA3CQ99985 751 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 ELOVL4Q9GZR5 314 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SDCBP2Q9H190 292 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 C6orf106Q9H6K1 298 aaPredicted RBP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SLC39A2Q9NP94 309 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 SPHK2Q9NRA0 654 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 AGPAT3Q9NRZ7 376 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 FAM49BQ9NUQ9 324 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 DNAJC17Q9NVM6 304 aaKnown RBP5.8□□□□□ -1.48
SPTA1-209ENST00000498708 PLK2Q9NYY3 685 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 TBC1D14Q9P2M4 693 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 ACTL7BQ9Y614 415 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 LRRK1Q38SD2 2015 aa5.8□□□□□ -1.48
SPTA1-209ENST00000498708 DOCK9Q9BZ29 2069 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 ATP8B3O60423 1300 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 CKAP5Q14008 2032 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 PCNX1Q96RV3 2341 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 A0A1B0GTL3 188 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 KIAA0391O15091 583 aaKnown RBP5.79□□□□□ -1.48
SPTA1-209ENST00000498708 TACC1O75410 805 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 RTN3O95197 1032 aaPredicted RBP5.79□□□□□ -1.48
SPTA1-209ENST00000498708 RNF224P0DH78 156 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 PFKLP17858 780 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 RAB6AP20340 208 aa5.79□□□□□ -1.48
SPTA1-209ENST00000498708 OXTRP30559 389 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms