RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 VPS51Q9UID3 782 aa19.28■□□□□ 0.68
ECM1-207ENST00000498579 ACACBO00763 2458 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 SMTNL1A8MU46 457 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 I6L893 689 aaPredicted RBP19.27■□□□□ 0.68
ECM1-207ENST00000498579 VILLO15195 856 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 SRGAP2O75044 1071 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 KRT3P12035 628 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 VAV1P15498 845 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 DESP17661 470 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 NUMBP49757 651 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 CCT8P50990 548 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 BNC1Q01954 994 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 NRG1Q02297 640 aaPredicted RBP19.27■□□□□ 0.68
ECM1-207ENST00000498579 NCAPHQ15003 741 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 ST3GAL2Q16842 350 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 INAVAQ3KP66 663 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 TRNP1Q6NT89 227 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 PPP1R2P3Q6NXS1 205 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 Q6ZVU0 165 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 TFAP2DQ7Z6R9 452 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 PHF13Q86YI8 300 aaPredicted RBP19.27■□□□□ 0.68
ECM1-207ENST00000498579 EMC1Q8N766 993 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 SLC30A5Q8TAD4 765 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 RXFP2Q8WXD0 754 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 FAM131CQ96AQ9 280 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 BPIFA3Q9BQP9 254 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 ORAI3Q9BRQ5 295 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 SEPT11Q9NVA2 429 aaKnown RBP19.27■□□□□ 0.68
ECM1-207ENST00000498579 MPP6Q9NZW5 540 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 PPM1HQ9ULR3 514 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 WASF3Q9UPY6 502 aa19.27■□□□□ 0.68
ECM1-207ENST00000498579 FNDC3AQ9Y2H6 1198 aaKnown RBP19.27■□□□□ 0.68
ECM1-207ENST00000498579 TBC1D3DA0A087WVF3 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3IA0A087WXS9 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3EA0A087X179 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3KA0A087X1G2 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 CXorf51AA0A1B0GTR3 108 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 FAM170AA1A519 330 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 ANKRD62A6NC57 917 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3FA6NER0 549 aaPredicted RBP19.26■□□□□ 0.67
ECM1-207ENST00000498579 C2CD4BA6NLJ0 364 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3LB9A6J9 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3HP0C7X1 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 SRCP12931 536 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 FERP16591 822 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 DRD3P35462 400 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 PI4KAP42356 2102 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 RECQLP46063 649 aaPredicted RBP19.26■□□□□ 0.67
ECM1-207ENST00000498579 SLC20A2Q08357 652 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 CDO1Q16878 200 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 CLEC16AQ2KHT3 1053 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 CCDC14Q49A88 953 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3GQ6DHY5 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3CQ6IPX1 549 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.26■□□□□ 0.67
ECM1-207ENST00000498579 GLRX5Q86SX6 157 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 PRPF39Q86UA1 669 aaKnown RBP19.26■□□□□ 0.67
ECM1-207ENST00000498579 TBC1D3Q8IZP1 549 aaPredicted RBP19.26■□□□□ 0.67
ECM1-207ENST00000498579 AOPEPQ8N6M6 819 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 C3orf20Q8ND61 904 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 PIP4K2CQ8TBX8 421 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 SETD7Q8WTS6 366 aaKnown RBP19.26■□□□□ 0.67
ECM1-207ENST00000498579 PSMB7Q99436 277 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 CDC6Q99741 560 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 OSBPL2Q9H1P3 480 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 IL21RQ9HBE5 538 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 DYRK4Q9NR20 520 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 PCOLCE2Q9UKZ9 415 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 MYO6Q9UM54 1294 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 NEUROG3Q9Y4Z2 214 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 SNX11Q9Y5W9 270 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 SNX10Q9Y5X0 201 aa19.26■□□□□ 0.67
ECM1-207ENST00000498579 C10orf142B7Z368 130 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 PLRG1O43660 514 aaKnown RBP19.25■□□□□ 0.67
ECM1-207ENST00000498579 BNIP3LO60238 219 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 PRNPP04156 253 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 ADRA1BP35368 520 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 CTSKP43235 329 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 MAPKAPK2P49137 400 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
ECM1-207ENST00000498579 FILIP1LQ4L180 1135 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 DBX2Q6ZNG2 339 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 APTXQ7Z2E3 356 aaKnown RBP19.25■□□□□ 0.67
ECM1-207ENST00000498579 SCNM1Q9BWG6 230 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 CEP44Q9C0F1 390 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 AASDHPPTQ9NRN7 309 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 OR12D3Q9UGF7 316 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 DMTF1Q9Y222 760 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 APOBEC2Q9Y235 224 aaKnown RBP19.25■□□□□ 0.67
ECM1-207ENST00000498579 SLCO1B1Q9Y6L6 691 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 CACNA1EQ15878 2313 aa19.25■□□□□ 0.67
ECM1-207ENST00000498579 ASCC3Q8N3C0 2202 aaKnown RBP19.25■□□□□ 0.67
ECM1-207ENST00000498579 A0A0D9SEW6 157 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 TMEM8BA6NDV4 472 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 YKT6O15498 198 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 LATO43561 262 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 PCDHGA12O60330 932 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 SNAP91O60641 907 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 MAGEC1O60732 1142 aa19.24■□□□□ 0.67
ECM1-207ENST00000498579 CBFA2T3O75081 653 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms