RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 XYLT1Q86Y38 959 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 TBC1D3Q8IZP1 549 aaPredicted RBP13.3□□□□□ -0.28
FN1-226ENST00000496542 MSANTD4Q8NCY6 345 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 SKA1Q96BD8 255 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 SERAC1Q96JX3 654 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 NAA15Q9BXJ9 866 aaKnown RBP13.3□□□□□ -0.28
FN1-226ENST00000496542 ARHGEF38Q9NXL2 777 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 SARDHQ9UL12 918 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 PAXBP1Q9Y5B6 917 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 OR51B4Q9Y5P0 310 aa13.3□□□□□ -0.28
FN1-226ENST00000496542 ARID1BQ8NFD5 2236 aaPredicted RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 ATRXP46100 2492 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 C1QTNF3-AMACRE9PGA6 284 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 F8VZ95 297 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 I6L893 689 aaPredicted RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 WNT9AO14904 365 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 PCDHGA12O60330 932 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 DFNA5O60443 496 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 SNAP91O60641 907 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 LSM8O95777 96 aaKnown RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 F9P00740 461 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 EEF1GP26641 437 aaKnown RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 CD38P28907 300 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 MAT2AP31153 395 aaKnown RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 FLT3P36888 993 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 SCNN1AP37088 669 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 GABRB2P47870 512 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 VASPP50552 380 aaPredicted RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 KRT83P78385 493 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 CNTN1Q12860 1018 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 SLC25A52Q3SY17 297 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 C5orf22Q49AR2 442 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 NAA35Q5VZE5 725 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 LRRC31Q6UY01 552 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 CCNI2Q6ZMN8 369 aaPredicted RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 TFAP2DQ7Z6R9 452 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 SH2D3CQ8N5H7 860 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 PIP4K2CQ8TBX8 421 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 CPA5Q8WXQ8 436 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 PSMB7Q99436 277 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 ELF4Q99607 663 aaPredicted RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
FN1-226ENST00000496542 STK33Q9BYT3 514 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 TMPRSS4Q9NRS4 437 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 TOR4AQ9NXH8 423 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 VPS51Q9UID3 782 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
FN1-226ENST00000496542 A0A1B0GTQ1 180 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 A0A1W2PR77 199 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 C10orf142B7Z368 130 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 ALOX15BO15296 676 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 SLC7A4O43246 635 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 TNFSF14O43557 240 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 PLRG1O43660 514 aaKnown RBP13.28□□□□□ -0.28
FN1-226ENST00000496542 MT-CO1P00395 513 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 MMEP08473 750 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 SRCP12931 536 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 RRM1P23921 792 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 KLK7P49862 253 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 SCAPQ12770 1279 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 SLC45A4Q5BKX6 768 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 AGBL4Q5VU57 503 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 NAPEPLDQ6IQ20 393 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 TRNP1Q6NT89 227 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 GATAD2AQ86YP4 633 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 ZNF683Q8IZ20 524 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 EPS8L1Q8TE68 723 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 NT5C3BQ969T7 300 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 PGAP3Q96FM1 320 aaPredicted RBP13.28□□□□□ -0.28
FN1-226ENST00000496542 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 MPP6Q9NZW5 540 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 FTSJ1Q9UET6 329 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 PPM1HQ9ULR3 514 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 TPX2Q9ULW0 747 aaKnown RBP13.28□□□□□ -0.28
FN1-226ENST00000496542 HS3ST2Q9Y278 367 aa13.28□□□□□ -0.28
FN1-226ENST00000496542 URB1O60287 2271 aaKnown RBP13.27□□□□□ -0.28
FN1-226ENST00000496542 E9PAM4 449 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 K7ERQ8 282 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 MCF2LO15068 1137 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 LATO43561 262 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 GFPT2O94808 682 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 ITGAVP06756 1048 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 NXPH1P58417 271 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 NOMO3P69849 1222 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 CT47A1Q5JQC4 288 aaPredicted RBP13.27□□□□□ -0.29
FN1-226ENST00000496542 C6orf118Q5T5N4 469 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 LINGO4Q6UY18 593 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 SETD3Q86TU7 594 aaPredicted RBP13.27□□□□□ -0.29
FN1-226ENST00000496542 PRPF39Q86UA1 669 aaKnown RBP13.27□□□□□ -0.29
FN1-226ENST00000496542 FAM131BQ86XD5 332 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 MARCH9Q86YJ5 346 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 DCAF4L2Q8NA75 395 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 FAM131CQ96AQ9 280 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 CCDC114Q96M63 670 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 CFAP57Q96MR6 1250 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 VPS16Q9H269 839 aa13.27□□□□□ -0.29
FN1-226ENST00000496542 GANQ9H2C0 597 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms