RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 LGMNQ99538 433 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 FEM1AQ9BSK4 669 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 SLC25A13Q9UJS0 675 aa18.05■□□□□ 0.48
TMEM53-209ENST00000495630 TRIM49BA6NDI0 452 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 MED7O43513 233 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 THEGLP0DJG4 465 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 CKMT1AP12532 417 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 CCR1P32246 355 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 UCNP55089 124 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 TAS2R38P59533 333 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 MTA1Q13330 715 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 BROXQ5VW32 411 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 FBXL22Q6P050 247 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 DENND1BQ6P3S1 775 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 PCSK4Q6UW60 755 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 CIR1Q86X95 450 aaPredicted RBP18.04■□□□□ 0.48
TMEM53-209ENST00000495630 HIC2Q96JB3 615 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 FARP1Q9Y4F1 1045 aaPredicted RBP18.04■□□□□ 0.48
TMEM53-209ENST00000495630 OR51B4Q9Y5P0 310 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 MYLKQ15746 1914 aa18.04■□□□□ 0.48
TMEM53-209ENST00000495630 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-209ENST00000495630 SLC31A1O15431 190 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 OPA1O60313 960 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 DXOO77932 396 aaKnown RBP18.03■□□□□ 0.48
TMEM53-209ENST00000495630 NUMBP49757 651 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 PCBP4P57723 403 aaKnown RBP18.03■□□□□ 0.48
TMEM53-209ENST00000495630 CDK17Q00537 523 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 RHDQ02161 417 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 ZNF177Q13360 481 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-209ENST00000495630 ARHGEF19Q8IW93 802 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 FMR1NBQ8N0W7 255 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-209ENST00000495630 SH2D3CQ8N5H7 860 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 IFT43Q96FT9 208 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 DHTKD1Q96HY7 919 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-209ENST00000495630 DEPDC7Q96QD5 511 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 UCKL1Q9NWZ5 548 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 CA5BQ9Y2D0 317 aa18.03■□□□□ 0.48
TMEM53-209ENST00000495630 A0A1W2PQU0 124 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 NEMP2A6NFY4 417 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 E5RJQ4 531 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 PSMA7O14818 248 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 GP1BAP07359 652 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 GLI1P08151 1106 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 ALPPL2P10696 532 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 AKT2P31751 481 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 LSSP48449 732 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 TMPRSS3P57727 454 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 ERVPABLB-1P60509 514 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 PITX1P78337 314 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-209ENST00000495630 STIM1Q13586 685 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 AUHQ13825 339 aaKnown RBP18.02■□□□□ 0.48
TMEM53-209ENST00000495630 POM121L1PQ3SYA9 428 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 CCDC40Q4G0X9 1142 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 TAF1BQ53T94 588 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-209ENST00000495630 Q6ZVU0 165 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 FAM174AQ8TBP5 190 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 ZNF606Q8WXB4 792 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 RNF34Q969K3 372 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 KREMEN1Q96MU8 473 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 RPRD1AQ96P16 312 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-209ENST00000495630 USP29Q9HBJ7 922 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 DDIT4Q9NX09 232 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 VPS28Q9UK41 221 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 PCDHB1Q9Y5F3 818 aa18.02■□□□□ 0.48
TMEM53-209ENST00000495630 TP53BP1Q12888 1972 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-209ENST00000495630 J3QKU1 62 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 PIAS2O75928 621 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 GIMD1P0DJR0 217 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 KRT5P13647 590 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 HNRNPA2B1P22626 353 aaKnown RBP18.01■□□□□ 0.47
TMEM53-209ENST00000495630 DUSP3P51452 185 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-209ENST00000495630 TAF5Q15542 800 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 ZNF284Q2VY69 593 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 PIP5KL1Q5T9C9 394 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 TMC6Q7Z403 805 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 HORMAD1Q86X24 394 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 DCP2Q8IU60 420 aaKnown RBP18.01■□□□□ 0.47
TMEM53-209ENST00000495630 FAM181AQ8N9Y4 354 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 TMIEQ8NEW7 156 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 OR52K2Q8NGK3 314 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 SMARCE1Q969G3 411 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 NAF1Q96HR8 494 aaKnown RBP18.01■□□□□ 0.47
TMEM53-209ENST00000495630 CCDC114Q96M63 670 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 SLC2A13Q96QE2 648 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 ABCG4Q9H172 646 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 EVA1BQ9NVM1 165 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 NLGN3Q9NZ94 848 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 HS3ST2Q9Y278 367 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 TBC1D30Q9Y2I9 924 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 ZNF462Q96JM2 2506 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 MGAQ8IWI9 3026 aa18.01■□□□□ 0.47
TMEM53-209ENST00000495630 SCAMP1O15126 338 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 FFAR2O15552 330 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 BNIP3LO60238 219 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 USP12O75317 370 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 CLDN11O75508 207 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 LETM1O95202 739 aaPredicted RBP18■□□□□ 0.47
TMEM53-209ENST00000495630 MPOP05164 745 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 PRLRP16471 622 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms