RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CBX6O95503 412 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 ADH1BP00325 375 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 FDPSP14324 419 aaKnown RBP9.18□□□□□ -0.94
GARNL3-219ENST00000495172 MUTP22033 750 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 F8A1P23610 371 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 CD82P27701 267 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 HNRNPH3P31942 346 aaKnown RBP9.18□□□□□ -0.94
GARNL3-219ENST00000495172 ST8SIA6P61647 398 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 KRT32Q14532 448 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 E2F5Q15329 346 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 SMTNL2Q2TAL5 461 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 DPH6Q7L8W6 267 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 GDF7Q7Z4P5 450 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 ZNF438Q7Z4V0 828 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 ABI3BPQ7Z7G0 1075 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 SLITRK4Q8IW52 837 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 BRSK2Q8IWQ3 736 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 DIS3L2Q8IYB7 885 aaKnown RBP9.18□□□□□ -0.94
GARNL3-219ENST00000495172 CPXM2Q8N436 756 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 MYCT1Q8N699 235 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 GLIS1Q8NBF1 620 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 LMLNQ96KR4 655 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 NSD1Q96L73 2696 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-219ENST00000495172 REEP2Q9BRK0 252 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 LRRC61Q9BV99 259 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 ZHX3Q9H4I2 956 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 CYP4F12Q9HCS2 524 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 RBAKQ9NYW8 714 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-219ENST00000495172 NCKIPSDQ9NZQ3 722 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 ERVW-1Q9UQF0 538 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 CSNK1G3Q9Y6M4 447 aa9.18□□□□□ -0.94
GARNL3-219ENST00000495172 PRRC2AP48634 2157 aaKnown RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 TRPM6Q9BX84 2022 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 SPTY2D1-AS1A0A0U1RR47 76 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 HHLA1C9JL84 531 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 TBL1XO60907 577 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 CST3P01034 146 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 TMEM191BP0C7N4 346 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 DDIT3P35638 169 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 RPIAP49247 311 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 SLC12A3P55017 1021 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 GUCY1B3Q02153 619 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 GNL2Q13823 731 aaKnown RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 PDE1CQ14123 709 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 DSG2Q14126 1118 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 MPPE1Q53F39 396 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 DCAF6Q58WW2 860 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 FSCBQ5H9T9 825 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 EFHC2Q5JST6 749 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 LCE2DQ5TA82 110 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 DYMQ7RTS9 669 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 PRIMA1Q86XR5 153 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 CCNJLQ8IV13 435 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 FAM217AQ8IXS0 508 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 FAM177A1Q8N128 213 aaPredicted RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 C4orf32Q8N8J7 132 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 PCDH19Q8TAB3 1148 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 WDR48Q8TAF3 677 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 ART4Q93070 314 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 FAM131CQ96AQ9 280 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 CGRRF1Q99675 332 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 CMKLR1Q99788 373 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 EPAS1Q99814 870 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 SRRTQ9BXP5 876 aaKnown RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 SMYD3Q9H7B4 428 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 FAM49BQ9NUQ9 324 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 HMGXB4Q9UGU5 601 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 SCML2Q9UQR0 700 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 STYXL1Q9Y6J8 313 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 OAS3Q9Y6K5 1087 aaKnown RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 POLEQ07864 2286 aa9.17□□□□□ -0.94
GARNL3-219ENST00000495172 FLNAP21333 2647 aaKnown RBP9.17□□□□□ -0.94
GARNL3-219ENST00000495172 EDDM13A0A1B0GTR0 161 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 A6NNZ2 444 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 LRRTM2O43300 516 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ANXA6P08133 673 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 CD99P14209 185 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 TSHRP16473 764 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 TCN2P20062 427 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 HNRNPA2B1P22626 353 aaKnown RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ADORA2BP29275 332 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 AKT2P31751 481 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 CLCN1P35523 988 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 LEPRP48357 1165 aaKnown RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 CHAF1BQ13112 559 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ERV3-1Q14264 604 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 SCARA5Q6ZMJ2 495 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ACOT1Q86TX2 421 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 CDH24Q86UP0 819 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 PARGQ86W56 976 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 SFR1Q86XK3 245 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 NT5DC4Q86YG4 428 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 ZNF295-AS1Q8N0V1 137 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 C12orf29Q8N999 325 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 SLC2A14Q8TDB8 520 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
GARNL3-219ENST00000495172 CACTINQ8WUQ7 758 aaKnown RBP9.16□□□□□ -0.94
GARNL3-219ENST00000495172 NDRG1Q92597 394 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms