RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 C5orf22Q49AR2 442 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 Q6ZVU0 165 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 C14orf80Q86SX3 495 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 SH2D3CQ8N5H7 860 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 EID2Q8N6I1 236 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 ZNF397Q8NF99 534 aaPredicted RBP22.69■■□□□ 1.22
HDDC3-203ENST00000494993 PIP4K2CQ8TBX8 421 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 HNRNPLLQ8WVV9 542 aaKnown RBP22.69■■□□□ 1.22
HDDC3-203ENST00000494993 SIX2Q9NPC8 291 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 SCUBE2Q9NQ36 999 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 VPS28Q9UK41 221 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 PPM1HQ9ULR3 514 aa22.69■■□□□ 1.22
HDDC3-203ENST00000494993 E9PAM4 449 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 M0QYT0 321 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 MCF2LO15068 1137 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 RFPL3O75679 317 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 MAT2AP31153 395 aaKnown RBP22.68■■□□□ 1.22
HDDC3-203ENST00000494993 KRT9P35527 623 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 MTIF2P46199 727 aaKnown RBP22.68■■□□□ 1.22
HDDC3-203ENST00000494993 CNTN1Q12860 1018 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 BNIP3Q12983 259 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 DNAJC3Q13217 504 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 AGBL4Q5VU57 503 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 OTUD1Q5VV17 481 aaPredicted RBP22.68■■□□□ 1.22
HDDC3-203ENST00000494993 IQCHQ86VS3 1027 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 TRIM69Q86WT6 500 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 SPATS2Q86XZ4 545 aaKnown RBP22.68■■□□□ 1.22
HDDC3-203ENST00000494993 SYNCQ9H7C4 482 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 DNAJC12Q9UKB3 198 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 DMTF1Q9Y222 760 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 TBC1D30Q9Y2I9 924 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 IGSF10Q6WRI0 2623 aa22.68■■□□□ 1.22
HDDC3-203ENST00000494993 TRPM6Q9BX84 2022 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 C1SP09871 688 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 CDK4P11802 303 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 ZNF18P17022 549 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 CLCN1P35523 988 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 ACADVLP49748 655 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 CDH4P55283 916 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 CAMK4Q16566 473 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 POM121L1PQ3SYA9 428 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 SLC47A2Q86VL8 602 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 SIK2Q9H0K1 926 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 PIGVQ9NUD9 493 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 RRN3Q9NYV6 651 aa22.67■■□□□ 1.22
HDDC3-203ENST00000494993 LOC400499M0QZD8 3231 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 FOXN3O00409 490 aaPredicted RBP22.66■■□□□ 1.22
HDDC3-203ENST00000494993 BNIP3LO60238 219 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 MAGEC1O60732 1142 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 CNTN5O94779 1100 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 ADCY5O95622 1261 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 PNMA6AP0CW24 399 aaPredicted RBP22.66■■□□□ 1.22
HDDC3-203ENST00000494993 OVGP1Q12889 678 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 BRMS1LQ5PSV4 323 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 SFMBT2Q5VUG0 894 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 KANSL1Q7Z3B3 1105 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 ZDHHC17Q8IUH5 632 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 TSC1Q92574 1164 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 NPY6RQ99463 290 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 TKTL2Q9H0I9 626 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 MUC3BQ9H195 1237 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 PREBQ9HCU5 417 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 PLCB1Q9NQ66 1216 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 ARHGEF38Q9NXL2 777 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 HS3ST2Q9Y278 367 aa22.66■■□□□ 1.22
HDDC3-203ENST00000494993 RHOCP08134 193 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 SRCP12931 536 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 HNF1BP35680 557 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 CXCR3P49682 368 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 CLDN6P56747 220 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 KRT83P78385 493 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 STAT4Q14765 748 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 SETMARQ53H47 684 aaPredicted RBP22.65■■□□□ 1.22
HDDC3-203ENST00000494993 ALFQ53S48 1182 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 PSMB7Q99436 277 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 WDCPQ9H6R7 721 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 ANLNQ9NQW6 1124 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.65■■□□□ 1.22
HDDC3-203ENST00000494993 STAP1Q9ULZ2 295 aa22.65■■□□□ 1.22
HDDC3-203ENST00000494993 SHROOM3Q8TF72 1996 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 PRAMEF26H0Y7S4 382 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 I6L893 689 aaPredicted RBP22.64■■□□□ 1.21
HDDC3-203ENST00000494993 CTSLP07711 333 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 JUPP14923 745 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 TFE3P19532 575 aaPredicted RBP22.64■■□□□ 1.21
HDDC3-203ENST00000494993 TAS2R38P59533 333 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 UBE2HP62256 183 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 MAN2A1Q16706 1144 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 FAM71AQ8IYT1 594 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 ZNF683Q8IZ20 524 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 MLKLQ8NB16 471 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 C2orf49Q9BVC5 232 aaPredicted RBP22.64■■□□□ 1.21
HDDC3-203ENST00000494993 VPS51Q9UID3 782 aa22.64■■□□□ 1.21
HDDC3-203ENST00000494993 FARP1Q9Y4F1 1045 aaPredicted RBP22.64■■□□□ 1.21
HDDC3-203ENST00000494993 CHD5Q8TDI0 1954 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 A0A087WV48 116 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 SNAP91O60641 907 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 MT-CO1P00395 513 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 SULT1E1P49888 294 aa22.63■■□□□ 1.21
HDDC3-203ENST00000494993 BPIFB4P59827 614 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms