RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TMC7Q7Z402 723 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 SETD3Q86TU7 594 aaPredicted RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 TMEM135Q86UB9 458 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 MIB1Q86YT6 1006 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ZBED8Q8IZ13 594 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 CPXM2Q8N436 756 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA6L1Q8N7Z2 621 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ATP11CQ8NB49 1132 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 CCNYQ8ND76 341 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 FBXO36Q8NEA4 188 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 PYROXD1Q8WU10 500 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 MZB1Q8WU39 189 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 WBP2Q969T9 261 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 TTC17Q96AE7 1141 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 CENPTQ96BT3 561 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ALG14Q96F25 216 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 OXNAD1Q96HP4 312 aaPredicted RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 SLC22A12Q96S37 553 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 RUFY1Q96T51 708 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 TCF25Q9BQ70 676 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 NAT9Q9BTE0 207 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 ZBED2Q9BTP6 218 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 PDFQ9HBH1 243 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 TLR9Q9NR96 1032 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 GKN1Q9NS71 199 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA6AQ9NYA3 693 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 VPS18Q9P253 973 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 IPO11Q9UI26 975 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 ZMYM5Q9UJ78 669 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 AGO1Q9UL18 857 aaKnown RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 VANGL2Q9ULK5 521 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 MAGED2Q9UNF1 606 aaPredicted RBP6.94□□□□□ -1.3
MSH5-217ENST00000494458 OR51B4Q9Y5P0 310 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
MSH5-217ENST00000494458 NUP205Q92621 2012 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA6L7A0A1B0GV03 622 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 TCRBV9S1A1TA0A576 114 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 MAGEB16A2A368 324 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ARHGAP42A6NI28 874 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 SDR42E2A6NKP2 422 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 FAM159BA6NKW6 160 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 PRRG1O14668 218 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 GRM6O15303 877 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PRAMEF11O60813 436 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 CLASP2O75122 1294 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 BANF1O75531 89 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ZMPSTE24O75844 475 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 MOCS2O96007 188 aaPredicted RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 GLUD1P00367 558 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 EPOP01588 193 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 C8AP07357 584 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PSMB4P28070 264 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 HOXD9P28356 352 aaPredicted RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 CDC25CP30307 473 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 SSTR1P30872 391 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 CTNNB1P35222 781 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PHBP35232 272 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 NPY2RP49146 381 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 RENBPP51606 427 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 GEMIN4P57678 1058 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 NR1H3Q13133 447 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 IHHQ14623 411 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 LONRF1Q17RB8 773 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PRSS36Q5K4E3 855 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 TMCO4Q5TGY1 634 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 KDELC1Q6UW63 502 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PRPF39Q86UA1 669 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 EXOC3L1Q86VI1 746 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 CYP4X1Q8N118 509 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ATPAF2Q8N5M1 289 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 LEMD2Q8NC56 503 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 NETO2Q8NC67 525 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 FAM76AQ8TAV0 307 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ARRDC2Q8TBH0 407 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 EPS8L3Q8TE67 593 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 SLC44A1Q8WWI5 657 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ARHGEF2Q92974 986 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 HMCESQ96FZ2 354 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 IMP4Q96G21 291 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 CELF6Q96J87 481 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 LMLNQ96KR4 655 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 PRICKLE1Q96MT3 831 aaPredicted RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 DDX50Q9BQ39 737 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 CCDC77Q9BR77 488 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 C17orf80Q9BSJ5 609 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 MCMBPQ9BTE3 642 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 SLC46A2Q9BY10 475 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 SLC25A51Q9H1U9 297 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 GLOD4Q9HC38 313 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ALG13Q9NP73 1137 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 SSU72Q9NP77 194 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 VPS45Q9NRW7 570 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 DNAJC17Q9NVM6 304 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 ZNF180Q9UJW8 692 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 ARHGAP26Q9UNA1 814 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 NOVA2Q9UNW9 492 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms