RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MCUR1Q96AQ8 359 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 OSBPL1AQ9BXW6 950 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TBC1D13Q9NVG8 400 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 ABI2Q9NYB9 513 aaPredicted RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 SFMBT1Q9UHJ3 866 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TRHDEQ9UKU6 1024 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 PRG3Q9Y2Y8 225 aaPredicted RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 SHROOM3Q8TF72 1996 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 A0A1W2PQ45 241 aaPredicted RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 A0A1W2PQY0 241 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TMEM189-UBE2V1I3L0A0 370 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 KRT36O76013 467 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 WFS1O76024 890 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 SERPINB4P48594 390 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 RCN2Q14257 317 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 KPNB1Q14974 876 aaKnown RBP14.06□□□□□ -0.16
VCP-207ENST00000493886 CCDC6Q16204 474 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TEX44Q53QW1 395 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 BRMS1LQ5PSV4 323 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 SCD5Q86SK9 330 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 CDKL2Q92772 493 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 CAPNS2Q96L46 248 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TRIM4Q9C037 500 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 GBA3Q9H227 469 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 SMOC2Q9H3U7 446 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 STARD7Q9NQZ5 370 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 MKS1Q9NXB0 559 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 SPATA7Q9P0W8 599 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 TTC3P53804 2025 aa14.06□□□□□ -0.16
VCP-207ENST00000493886 GYG2O15488 501 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 MSI1O43347 362 aaKnown RBP14.05□□□□□ -0.16
VCP-207ENST00000493886 USP12O75317 370 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 OAZ2O95190 189 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 RCN1Q15293 331 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 PUS10Q3MIT2 529 aaKnown RBP14.05□□□□□ -0.16
VCP-207ENST00000493886 DCP1BQ8IZD4 617 aaKnown RBP14.05□□□□□ -0.16
VCP-207ENST00000493886 SLC43A3Q8NBI5 491 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 CASP10Q92851 521 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 HAPLN3Q96S86 360 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 VAT1Q99536 393 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 NMUR2Q9GZQ4 415 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 KCNK13Q9HB14 408 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 SLC17A6Q9P2U8 582 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 HTTP42858 3142 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 TRPA1O75762 1119 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 CNTFP26441 200 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 CCR1P32246 355 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 KCTD11Q693B1 232 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 ITPRIPL1Q6GPH6 555 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 FBXO27Q8NI29 283 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 FAM81AQ8TBF8 368 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 PXYLP1Q8TE99 480 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 FAM193BQ96PV7 902 aaPredicted RBP14.05□□□□□ -0.16
VCP-207ENST00000493886 YIPF3Q9GZM5 350 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 GPBP1L1Q9HC44 474 aaPredicted RBP14.05□□□□□ -0.16
VCP-207ENST00000493886 PCMTD2Q9NV79 361 aa14.05□□□□□ -0.16
VCP-207ENST00000493886 PAGE1O75459 146 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 POLBP06746 335 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 NFKB1P19838 968 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 MUM1Q2TAK8 710 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 LHX8Q68G74 356 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 CAPRIN2Q6IMN6 1127 aaKnown RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 CES3Q6UWW8 571 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 TIFABQ6ZNK6 161 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ZCCHC23Q6ZST2 131 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 DPF3Q92784 378 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 TEKT5Q96M29 485 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 MLPHQ9BV36 600 aaPredicted RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 NMUR1Q9HB89 426 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 NUDT5Q9UKK9 219 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 A0A1W2PQH9 124 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ERI2A8K979 691 aaKnown RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 JCHAINP01591 159 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 COG7P83436 770 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 NAB1Q13506 487 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 PACS1Q6VY07 963 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ARID3BQ8IVW6 561 aaPredicted RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 NDUFAF2Q8N183 169 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 WDR60Q8WVS4 1066 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 CASS4Q9NQ75 786 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 BFARQ9NZS9 450 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 VANGL2Q9ULK5 521 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ARHGAP42A6NI28 874 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 FCHO1O14526 889 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 SMNDC1O75940 238 aaKnown RBP eCLIP14.04□□□□□ -0.162e-7■■■■□ 23.2
VCP-207ENST00000493886 INHAP05111 366 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ENO1P06733 434 aaKnown RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 ESRRAP11474 423 aaPredicted RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 TMPRSS15P98073 1019 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ACSBG2Q5FVE4 666 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 SPANXN3Q5MJ09 141 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 SDHAF4Q5VUM1 108 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
VCP-207ENST00000493886 DNAAF3Q8N9W5 541 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 STKLD1Q8NE28 680 aa14.04□□□□□ -0.16
VCP-207ENST00000493886 ZSCAN18Q8TBC5 510 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms