RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 DUSP10Q9Y6W6 482 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 CELSR3Q9NYQ7 3312 aa12.58□□□□□ -0.4
UPF3A-210ENST00000493727 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
UPF3A-210ENST00000493727 PLXND1Q9Y4D7 1925 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 A0A1W2PQH9 124 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 YJEFN3A6XGL0 299 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 E7ENQ6 273 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 MYO1FO00160 1098 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 MOCS3O95396 460 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 MBL2P11226 248 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 GPD1P21695 349 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 PSMA2P25787 234 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 OPRD1P41143 372 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 TUBP50607 506 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 USP39Q53GS9 565 aaKnown RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 ZNF468Q5VIY5 522 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 NAIF1Q69YI7 327 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 C1orf229Q6ZS94 237 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 SCML4Q8N228 414 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 EMC1Q8N766 993 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 USP33Q8TEY7 942 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 EZH1Q92800 747 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 BTBD6Q96KE9 485 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 EDEM2Q9BV94 578 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 POPDC2Q9HBU9 364 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 LCMT1Q9UIC8 334 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 STAP1Q9ULZ2 295 aa12.57□□□□□ -0.4
UPF3A-210ENST00000493727 DNMT3AQ9Y6K1 912 aaPredicted RBP12.57□□□□□ -0.4
UPF3A-210ENST00000493727 TCRBV5S1A1TA0A578 114 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 E2F8A0AVK6 867 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 LNP1A1A4G5 178 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 BCLAF3A2AJT9 711 aaKnown RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 GIPC1O14908 333 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 ALDH1A2O94788 518 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 APODP05090 189 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 CYP17A1P05093 508 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 RALAP11233 206 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 NCAM1P13591 858 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 PDGFRAP16234 1089 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 SDC4P31431 198 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 RFC1P35251 1148 aaPredicted RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 SSR1P43307 286 aaKnown RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 SULT1E1P49888 294 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 NOVA1P51513 510 aaKnown RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 DGKEP52429 567 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 RPL7AP62424 266 aaKnown RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 ZXDBP98169 803 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 MESDQ14696 234 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 TCEAL1Q15170 157 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 DHCR24Q15392 516 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 DCAF6Q58WW2 860 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 HECTD3Q5T447 861 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 SNX30Q5VWJ9 437 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 DAAM2Q86T65 1068 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 ADGRG2Q8IZP9 1017 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 JOSD2Q8TAC2 188 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 RXFP2Q8WXD0 754 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 EDEM1Q92611 657 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 PNKPQ96T60 521 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 NACA2Q9H009 215 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 KCND1Q9NSA2 647 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 ABCC13Q9NSE7 274 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 IL37Q9NZH6 218 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 CFAP97Q9P2B7 532 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 IP6K2Q9UHH9 426 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 GDF2Q9UK05 429 aaPredicted RBP12.56□□□□□ -0.4
UPF3A-210ENST00000493727 MMP17Q9ULZ9 603 aa12.56□□□□□ -0.4
UPF3A-210ENST00000493727 CEP192Q8TEP8 1941 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 FAM92AA1XBS5 289 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 TMEM191CA6NGB0 347 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 C2CD4BA6NLJ0 364 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 K7EQS6 105 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 DCLK1O15075 740 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 MTA2O94776 668 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 ADH5P11766 374 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 RARGP13631 454 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 GBP1P32455 592 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 FLT3P36888 993 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 MATKP42679 507 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 ZNF252P-AS1Q0IIN9 211 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 CDO1Q16878 200 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 ZNF569Q5MCW4 686 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 BHLHA9Q7RTU4 235 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 TADA2BQ86TJ2 420 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 RASSF3Q86WH2 238 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 SYCE1Q8N0S2 351 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 GOLGA6L1Q8N7Z2 621 aa12.55□□□□□ -0.4
UPF3A-210ENST00000493727 SLC2A13Q96QE2 648 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms